| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2274 |
|---|
| Symbol | |
|---|
| ID | 4671298 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 2405500 |
|---|
| End bp | 2405952 |
|---|
| Gene Length | 453 bp |
|---|
| Protein Length | 150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639839341 |
|---|
| Product | transport-associated |
|---|
| Protein accession | YP_986513 |
|---|
| Protein GI | 121594617 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.431584 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.766565 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAACCC CTCTTTTTCG AGCGTCGCGC TGGACCGTTT TCGCCGCTGC TGCTGCGCTG
GCCGCCGGGC TGAGTGCTTG TAACAAGGCC GAGGAACCCA CGGCCGGGCA ACGCCTGGAC
TCCGCCATCA ACAAGACCGA ACAGGCGGCC CAGGATGCCA AGCAAAAAAT GGAATCCGCG
GCGCAGGAAG CCGGGCAGGC TTCACGCAAC GCCACGGCCG ACGCAGCCGC CCTTATGGAC
GATGCCGGCA TCACCACCAA GGTGAACGCG GGCCTGGCGC AAGACCCGGA CCTCAGCGCC
ATCAAGATCG ACGTGGACAC CCGTGCGGGC GTCGTCACGC TCAATGGCCC CGTGAAAAGC
GAGCAGGCCC GTGACCGCGC CAGCCAGATC GCGCAGGCCG TACCGGGCGT GACCTCGGTG
GTCAACAACC TCACCATCTC CAGCGGCGGC TGA
|
|---|
| Protein sequence | MTTPLFRASR WTVFAAAAAL AAGLSACNKA EEPTAGQRLD SAINKTEQAA QDAKQKMESA
AQEAGQASRN ATADAAALMD DAGITTKVNA GLAQDPDLSA IKIDVDTRAG VVTLNGPVKS
EQARDRASQI AQAVPGVTSV VNNLTISSGG
|
|---|
| |