Gene Ajs_2021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2021 
Symbol 
ID4672495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2126920 
End bp2128308 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content68% 
IMG OID639839099 
Productphosphomannomutase 
Protein accessionYP_986273 
Protein GI121594377 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.155894 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGCTTT CTCCCGCGAT CTTCAAGGCC TACGACATCC GCGGCATCGT GCCCAGCACG 
CTCAACGACG ACGTGGCCCG TGCCCTCGGC CGGGCCTTTG GCACCGCCGC ACTCGCGCAG
GGCGAGCGTA CGGTGGCTGT GGGACGCGAC GGGCGCCTGT CGGGCCCGGC GCTCTCGGCC
GCGCTGATCC AGGGCCTGGT GGACGCAGGC ATCGAGGTCA TCGACATCGG CATGAGCACC
ACGCCCCTGC TGTACTTCGC AGCCAGCACG CTATGCGCCA GCGGCATCCA GGTCACGGGC
AGCCACAACC CCAAGGACTA CAACGGCTTC AAGATGGTGC TGGCCGGTCG CGCGATCTAC
GGCGAGGAAA TCCAGCAGCT ACGCCGCACC ATGGAGCAGC AGAGCTGGCA GCTGCGCGAA
GGCGGCCACG TGCGCCATGA GGACGTGCTG CCCGCCTACG TGCAACGCAT CGTGGGCGAC
GTGAAGCTCG CGCGGCCCAT GAAGATCGTG GTGGACAGCG GCAACGGCAT CGCCGGTGCG
TCGGCGCCCG GCATCTTCCG TGCATTGGGC TGTGAGGTGA TCGAGCTGTT TTCGGAGGTG
GACGGCAACT TCCCCAACCA CCACCCCGAC CCCAGCAAGC CCGACAACCT GCGCGACGTG
ATCGAGGCCT TGAAGGCCAG CGACGCCGAA CTGGGCCTGG CCTTCGACGG CGACGGCGAC
CGCCTGGGCA TCGTGACCAA GGACGGCCAG AACATCTTCC CCGACCGGCA GATGATGCTG
TTCGCCCAGG ATGTGCTCTC GCGCGTGCCG GGTGCACCCA TCCTGTTCGA CGTGAAGTGC
ACGCAGCGCC TGGCGCCCGC CATCGAGGCC GCGGGCGGCC AGCCGCAGAT GTACAAGACC
GGCCATTCGC TCATCAAGGC ACGCATGAAA GAGCTGGACG CGCCCCTGGG CGGCGAGATG
AGCGGCCACA TCTTCTTCAA GGAGCGCTGG TTCGGTTTTG ACGACGGCAC GTATGCAGGC
TGCCGCCTGC TGGAAATCCT GAGCCGCCAT ACCGACCCCA GCGCCGTGCT GAACGCCCTG
CCCACGAGCC ATTCCACGCC CGAACTCAAC GTGCATTGCG AGGAGGGCGA GCCCCATCGC
CTGACGGCCG AGTTGCAGGC GCTGGCGGCC GACGCGTTTG CGGCGCCGGC CCGCATCAGC
ACCATCGACG GCCTGCGCGT GGACTGGCCC GATGGCTTTG GCCTGATCCG CGCCAGCAAC
ACCACGCCGG TGCTGGTGCT GCGCTTCGAG GGCCACACCG ACGCCGCGCT GCAGCGCATC
GAAGCCGCCA TGCTGGCGCT GCTGGAACGC GTGAAGCCCG GCGCCCAGGT GGGCGGCGCC
GCGCACTGA
 
Protein sequence
MQLSPAIFKA YDIRGIVPST LNDDVARALG RAFGTAALAQ GERTVAVGRD GRLSGPALSA 
ALIQGLVDAG IEVIDIGMST TPLLYFAAST LCASGIQVTG SHNPKDYNGF KMVLAGRAIY
GEEIQQLRRT MEQQSWQLRE GGHVRHEDVL PAYVQRIVGD VKLARPMKIV VDSGNGIAGA
SAPGIFRALG CEVIELFSEV DGNFPNHHPD PSKPDNLRDV IEALKASDAE LGLAFDGDGD
RLGIVTKDGQ NIFPDRQMML FAQDVLSRVP GAPILFDVKC TQRLAPAIEA AGGQPQMYKT
GHSLIKARMK ELDAPLGGEM SGHIFFKERW FGFDDGTYAG CRLLEILSRH TDPSAVLNAL
PTSHSTPELN VHCEEGEPHR LTAELQALAA DAFAAPARIS TIDGLRVDWP DGFGLIRASN
TTPVLVLRFE GHTDAALQRI EAAMLALLER VKPGAQVGGA AH