| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1973 |
|---|
| Symbol | |
|---|
| ID | 4673803 |
|---|
| Type | |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | Yes |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 2071022 |
|---|
| End bp | 2071979 |
|---|
| Gene Length | 958 bp |
|---|
| Protein Length | |
|---|
| Translation table | |
|---|
| GC content | 58% |
|---|
| IMG OID | 640068363 |
|---|
| Product | |
|---|
| Protein accession | |
|---|
| Protein GI | |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3039] Transposase and inactivated derivatives, IS5 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.855621 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.910712 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGGTGATC CGCTGGCATT GCTAAACAAG CACGTCAATT TTGCCGTGAT GGCTCAGGAA
ATTGACCGCT GGGTTCCTCG CCCGAGCCGC GCTAAAGGCG GTAGGCCTCC GTACCCAACA
GAGCTCATGA CGCGCCTGCT GGTCTTGCAG CAATTGTTCA ATCTGTCCGA CGAGCAGATG
GAGTTTCAAT TACTCGACCG CATGAGCTTT CAGCGCTTTG CCGGACTAAA GGACAGTGCG
CGCATGCCGG ATCGCAATAC GATCTGGAAT TTTCGTGAGC GTCTCGTTCA GGCCAAGGTC
GAGCATCTGT TTTGATGAAG TGCAGCGCCA ACTGCAGCTC AACGGCTTCA ACGCACGCGA
AGGGCAAATC ATCGACGCCA GCATCGTCCG TGCTCCAACC CAGCACAACA CGGCTGAAGA
GCAAGAAATC GTGAAGCAGC GAGCAGCCCC CATCGAGTGG GAACCGGCCA AGCGCCGGCA
AAAGGATGTC GAGGCGCGCT GGACGAAGAA GCACCGAAAA TCGTACTTCG GCTACAAGCT
GTCGGTCAGC GTGGATCGCC GGCACAAACT GATCCGCAAC GTGCGGGTAA GCGATGCCAG
CGAGGCAGAC ACACTTCATT TGGTCGATGT GCTGGATCGA GGGAACAGCA GCCGGGACTT
CTGGGCTGAC CGTGGCTATC ACGACAAGCC ACGCGAGCGC TGGCTCAAGC TCAATGGATG
GCGCCCGCAC ATTCAGCGCA AAGGGCAAGC AGGTAAGCCT ATCGGCGAGC GGGACAAGGC
CCGCAACAAG CGTATCGCCA GCCCACGCGC TCGGGTCGAG CACATATTTG CCAGCCTGGC
GCAGATGGGT GGCAAGATGA TTCGAAGCAT CGGCCTGGCA CGTGCGCAGT TTGGACTAAC
GATCAAATCA GCGGTGTACA ACCTGAAAAG GATGTCGAGC CTGCTGGAGA TGGCGTGA
|
|---|
| Protein sequence | |
|---|
| |