Gene Ajs_1957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1957 
Symbol 
ID4673150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2052352 
End bp2053035 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content72% 
IMG OID639839038 
ProductDTW domain-containing protein 
Protein accessionYP_986213 
Protein GI121594317 
COG category[S] Function unknown 
COG ID[COG3148] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTCCT GCACCCACCT GCCCCGCCGG CCCGTATGCC CCCGCTGCCA GCGCCCCGCC 
GCAGCCTGCA TCTGCGCCGC CGTGCGGCCC GTGGCGCACC AAGTGCAGGT ACTGATCCTC
ATGCACCCGC TGGAGCAGCA CCAGGCCAAG GGCACGGCAC GGCTGCTGCA CCTGTGCCTG
CCGGGCAGCC GCATCGTGGT GGGCGAAACG TTCGGCGACG CTGCCTTGGC GCAGGAAATC
ACCGCCCCCT GGGTTGATGG CGACCGGCAG GCACCGCGCC GCGCAGTGCT GTTGTACCCG
CCCACGCCGC CCGACCCGCA GCACCCCATG CTGCCCGCGC CGCCGCTGTC GACCGACTGG
CTGGCAGCGC CCGAACGGCT GCGCCTGGTG GTGCTGGACG GTACCTGGCG CAAGAGCCGC
AGGATGCTGT GGGCCAACCC TGCGTTGCAG GCCCTGCCGC GCCTGGCCCT GCAGCAGGTA
CCGCCCACGC GTTACGCCGT GCGCAAGGCG CACGCGCCCC ACCAGCTCAG CACGCTGGAG
GCCGCGCAGT GCGCACTGCA ACAACTGGAA CCCGCCAACC CGCACATCGC CGCGCTGAGC
CAGGCCATGG ATGCATTGAT GGCGCTGCTG CGCTCGCGCG ATGGCGCAGC ACGCTCGGCT
ATGCTCGGAC CAGACCTTTC ATAA
 
Protein sequence
MPSCTHLPRR PVCPRCQRPA AACICAAVRP VAHQVQVLIL MHPLEQHQAK GTARLLHLCL 
PGSRIVVGET FGDAALAQEI TAPWVDGDRQ APRRAVLLYP PTPPDPQHPM LPAPPLSTDW
LAAPERLRLV VLDGTWRKSR RMLWANPALQ ALPRLALQQV PPTRYAVRKA HAPHQLSTLE
AAQCALQQLE PANPHIAALS QAMDALMALL RSRDGAARSA MLGPDLS