| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1932 |
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| Symbol | |
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| ID | 4672927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 2022533 |
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| End bp | 2023315 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639839013 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_986188 |
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| Protein GI | 121594292 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.125802 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAAC ACCTCTACAT CCTCACCGGC GGCTCGCGCG GCATGGGCCT GGCCATGGCA
CACCAGTTGC TGAAACCCGG CAACACGCTG ATCAGCCTGG CGCGCAGCAC CTCTGCGCCG
TTGTCCACGG CCGTGCCGCA GGGCGCGACG CTGGAGCAAT GGAGCGTGGA CCTGGCCCAG
CCTGCGCAGG CCGCTCAGCG CCTGCGCGAA TGGCTGGCCA CGCAGCCTGC CTGCCGATAC
GCCAGCGCCA CGCTGATCAA CAACGCCGGC GTGATCCCGC GCATCGCACC GCTGTCGGCA
TGCGCCAGCC CGCAGGACAT GGCCGAGCTG TCCAACGCGC TGCGCGTGGG ACTGGAGGCG
CCGATGCTGC TGACGGCCGC CTTCCTGGGC GCGACCGAAG GCTGGGCTGC ACCGCCCCAC
TCCGTGGCGC GCAGGGTGCT GAACATCTCT TCGGGGCTGG GGCGTCGCGC CATGGCGTCG
CAGTCGGGCT ACTGCGCGGC CAAGGCCGGC ATGGACCATT TCACGCGGTG CCTGGCGCTG
GACGAAGCCG CCAAGCCCCA CGGCGCCAAG GTATGCTCGC TGGCTCCCGG TGTGATCGAC
ACCGACATGC AGATCCAGCT GCGCGGCGCC AACCCGGCCG ACTTTCCGGA TGTGCAGAAC
TTCGCCGCCC TCAAGACGGG CGGCATGCTC ACCTCGCCAG ACGCCGCGGC TGCCCGCGTG
CTCGCCTGGC TGCAGCGTAC AGACTTCGGC ACCAACCCCG TGGCCGACGT GCGCGAGGCC
TGA
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| Protein sequence | MTQHLYILTG GSRGMGLAMA HQLLKPGNTL ISLARSTSAP LSTAVPQGAT LEQWSVDLAQ
PAQAAQRLRE WLATQPACRY ASATLINNAG VIPRIAPLSA CASPQDMAEL SNALRVGLEA
PMLLTAAFLG ATEGWAAPPH SVARRVLNIS SGLGRRAMAS QSGYCAAKAG MDHFTRCLAL
DEAAKPHGAK VCSLAPGVID TDMQIQLRGA NPADFPDVQN FAALKTGGML TSPDAAAARV
LAWLQRTDFG TNPVADVREA
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