| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1866 |
|---|
| Symbol | |
|---|
| ID | 4670991 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 1951883 |
|---|
| End bp | 1952227 |
|---|
| Gene Length | 345 bp |
|---|
| Protein Length | 114 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639838951 |
|---|
| Product | putative sigma E regulatory protein, MucB/RseB |
|---|
| Protein accession | YP_986126 |
|---|
| Protein GI | 121594230 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.892343 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAACCC TGTCAGAAAC CGTCGGCCCA CTCCTGTTCG CGCGGGGCGC CGATGAAAAT
CAATGTCGGC TTTCCGCCAT CGTCGTCACC CCGGACAACC TCGATCCGCC CCTCCTGGTT
CCCGCCGATG GTCAGGAGGC CATGCCTGCG CGGCTGTATT CGCAGTTCGG CAAGACGGTC
TGGCGATACG ACTTCCGGCT CCCTTCGCGC GAGAACGCCG CCTACCGTTT GGGCGATGTC
ATTTTTCCGG TGGCTGCAGA CCTTTCAGGA GATGTGCGGA TCGCCTACGT CTCTTGCAAT
GGGGCTCTGT TGAATTTCGA GTGGGTTACC GGGCATGAGG GTTGA
|
|---|
| Protein sequence | MTTLSETVGP LLFARGADEN QCRLSAIVVT PDNLDPPLLV PADGQEAMPA RLYSQFGKTV
WRYDFRLPSR ENAAYRLGDV IFPVAADLSG DVRIAYVSCN GALLNFEWVT GHEG
|
|---|
| |