Gene Ajs_1860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1860 
Symbol 
ID4670806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1945732 
End bp1946943 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content64% 
IMG OID639838945 
Producthypothetical protein 
Protein accessionYP_986120 
Protein GI121594224 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.653416 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCCGGC GACTCGCCGT GGTGCTTAAG GAAGAGCTGA TGAAACCCAC CGAACTCCCC 
GCCGCCGTAC GCGCGACCGA CACCCGAGCC ACCCTGCCCA TCCCGGCACC GCCCCTGGAA
ACCGGCGCCA TCGTGCTGCG GCCGGAGCAG GTACCGCAGG CGCAGCAGGC TTTGCGGACG
CTGGACTTCG GCGCGGTTGC GCCCGGTGAC ATCATCAACA TCGGCCTGGG CTCTGAACAG
GCGCTGCAGC AGACTCTGGA CGGCTTCCTG GTGCGTCTTG ACAAGAAGAC GGCTGCCAAG
GTGTTCGCGC TGTTCGAGCG CCTGGAAAAG GGGGTCGACG ACGCCAAGCT CCCCGAGATC
CTGGAGAAGA TCCAGAGGGG TGAGCAGCGC GGATTTTTCG CCAGCCTTAT TGCCAAGGTT
GCCGGGCGCA AACCCGAGGA TGCCTTTCGT GAATTCATGC AGGAAGTCGG CGATCTGGTG
GCTGGCCGCA CGCGGACTCT GGCCGACGAG ATGCAACACC TCGAAGGCGA ACTGTCGAAG
GAGATGAAGA CGCTGTTCGG CGAACTGCAG GCGCTCGACA CGCTCAAAAA ATCGTATGGT
GAGCATTTCT CGAGCTTCAC CCTCGACGCT GCAGTGGCCC GCGCCTTCCT CGAGAAGGCC
AGGCAGTACG TGGCGCAGGA GCAAACAACC GCCGACCCCG CCGATGTGGC CGCGCAGGCC
CGCGTGCGCG AGCTGCAGGA CAAACTCAGG CTGCTGGAAA GCCGGGCACT GGCGCTGGAA
GGCACCTATA CGCGCCTGCC GGCAGACCAG ATGGTGATCC AACAGATCGA GGCCGCCGGG
GTGGCGACGC TGCAGGAGAC GGCCACCACT GTCTCTTCGC GCTTTGCTTC GATCAAGATG
ACGCTGCTGT CGATCCATGG CGCTTTTGCC GTGAAATCCG TGCAGCAGAT CGCCGAGCGC
CAGGCGCGCC TGGACCAGCA GCTCACACAG TTGCGCGGGC AGGCGACCAA GGACGTGGCG
GTCACCGCGG CGAAGGCGCC CGGCGAAAAC CGCGTGGCGC AGGCCGAGCA GATCGCGGCC
ATCATCGCCC AGACCCGCGA GATCCACCAA CTGGTTGAAG CGGCCAAGAA GGAAACTGAA
GAAAAGTTCG AGCAGGCGCG GAGCATGTTC GAACAGTCGC GCGCGGACCT TGCCGCGCTC
CACAAATCAT GA
 
Protein sequence
MARRLAVVLK EELMKPTELP AAVRATDTRA TLPIPAPPLE TGAIVLRPEQ VPQAQQALRT 
LDFGAVAPGD IINIGLGSEQ ALQQTLDGFL VRLDKKTAAK VFALFERLEK GVDDAKLPEI
LEKIQRGEQR GFFASLIAKV AGRKPEDAFR EFMQEVGDLV AGRTRTLADE MQHLEGELSK
EMKTLFGELQ ALDTLKKSYG EHFSSFTLDA AVARAFLEKA RQYVAQEQTT ADPADVAAQA
RVRELQDKLR LLESRALALE GTYTRLPADQ MVIQQIEAAG VATLQETATT VSSRFASIKM
TLLSIHGAFA VKSVQQIAER QARLDQQLTQ LRGQATKDVA VTAAKAPGEN RVAQAEQIAA
IIAQTREIHQ LVEAAKKETE EKFEQARSMF EQSRADLAAL HKS