| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1838 |
|---|
| Symbol | sbcB |
|---|
| ID | 4672099 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 1917634 |
|---|
| End bp | 1919073 |
|---|
| Gene Length | 1440 bp |
|---|
| Protein Length | 479 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639838926 |
|---|
| Product | exonuclease I |
|---|
| Protein accession | YP_986101 |
|---|
| Protein GI | 121594205 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2925] Exonuclease I |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0510838 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.42873 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACACTT TTCTCTGGCA CGACTACGAA ACCTTTGGCG CCAACACGCG CCGCGACCGC
CCCGCACAGT TCGCCGCCGT TCGCACCGAT GCCGAGCTCA ACGAGATCGG CGAGCCGCTG
ATGATCTACT GTCGCCCGGC CAACGACTAT CTGCCGGATC CGCAGTCGTG CCTGATCACC
GGTATCACGC CCCAGCTGTG CCTGGAAAAG GGTTTGCCCG AGCGCGAATT CGCCGCCCGC
ATCGAGGCCG AGCTGGCGCT GCCCGGCACC ATTGGCGTGG GCTACAACAC CATCCGTTTC
GACGACGAGA TCACGCGCTT CATGTTCTGG CGCAATCTCA TGGACCCGTA TGCGCGCGAG
TGGCAGAACC AGTGCGGCCG CTGGGACCTG CTGGATGTGG TGCGCCTGAC CTACGCGCTG
CGTCCCGAGG GCATCGAGTG GCCCGAGGTG GACGGCAAGC CCAGCTTCCG CCTGGAGCAT
CTGTCCAAAG CCAACGGCCT GGCGCACGAG GCCGCGCACG ACGCGCTGTC GGACGTGCGC
GCAACCATCG CGCTGGCGCG GCTCATCCGT TCACGCAACC CGCGGCTGTT CGACTTCGCG
CTGTCCCTGC ACAAGAAGGA CCGCGTGGCG GCCGAGCTGC GCCTGCCCAC CACGGCGCAG
GAGGCACGGC CGTTCCTGCA CGTCTCGGGC ATGTTCCCTG CCGAACGCGG CTGCCTGGCC
GTGATGTGGC CGCTGGCCAG CCACCCGACC AACAAGAATG AGCTGCTGGC CTGGGATCTG
GCGCAAGACC CTTCCGAGCT GGCCCGGCTG TCCGCTGACG AGATCCGCAC GCGCCTGTTC
ACGCGCGCGG CCGACCTGCC CGAGGGCGTG ACACGCCTGC CGCTCAAGAG CGTGCATCTG
AACAAGTCGC CGATGGTGGT GGGTAACCTC AATACGCTCA CGCCGGACAT GGCGCAGCGC
TGGGGCATCG ACCTGCCACA GGCCGCGCTG CATGCCGCCG CGGCGCGCGC GTTGCCCGAC
CTGACAGCCG TGTGGGCCCA GGTGTTCCAG CGCCCTGCGG AGGGGCCGCT GGATGTGGAC
CAGGACCTCT ACGGGGGCTT CGTGGGCAAT GAGGACCGCC GCCGCCTGAA CCGTCTGCGC
GCATTGCCCG GCGAAGAGTT GGCGCACGAG CGCCTGGGTT TTGACGACGC GCGCCTGGCC
GAGCTGGTCT GGCGCTACCG TGCGCGCAAC TTCCCGCACA CGCTCTCGCC CGAGGAGCAG
GAGCGCTGGG AGGCGCACCG CGTCGCCATG CTGGTGGAGG GCGAGGGCGG CGGGCTGACG
TTCGACGCGC TGTTCGAGCG CCTGGACACG CTGGGCGCCG AGGCCGATGA CGAACGCACC
GAGGCCATCC TCGGCGCGGT GTACGACTAC GCCGAGAGCA TCGCGCCCGG CATGGACTGA
|
|---|
| Protein sequence | MHTFLWHDYE TFGANTRRDR PAQFAAVRTD AELNEIGEPL MIYCRPANDY LPDPQSCLIT
GITPQLCLEK GLPEREFAAR IEAELALPGT IGVGYNTIRF DDEITRFMFW RNLMDPYARE
WQNQCGRWDL LDVVRLTYAL RPEGIEWPEV DGKPSFRLEH LSKANGLAHE AAHDALSDVR
ATIALARLIR SRNPRLFDFA LSLHKKDRVA AELRLPTTAQ EARPFLHVSG MFPAERGCLA
VMWPLASHPT NKNELLAWDL AQDPSELARL SADEIRTRLF TRAADLPEGV TRLPLKSVHL
NKSPMVVGNL NTLTPDMAQR WGIDLPQAAL HAAAARALPD LTAVWAQVFQ RPAEGPLDVD
QDLYGGFVGN EDRRRLNRLR ALPGEELAHE RLGFDDARLA ELVWRYRARN FPHTLSPEEQ
ERWEAHRVAM LVEGEGGGLT FDALFERLDT LGAEADDERT EAILGAVYDY AESIAPGMD
|
|---|
| |