Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_1719 |
Symbol | |
ID | 4673116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 1788306 |
End bp | 1788665 |
Gene Length | 360 bp |
Protein Length | 119 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639838808 |
Product | type IV pilus assembly PilZ |
Protein accession | YP_985985 |
Protein GI | 121594089 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3215] Tfp pilus assembly protein PilZ |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.137522 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCAGTC CCTCCACAGC GCCGCGCCCC AGCGTCATGC AGCTGAACAT CAAGGAAAAG GCCGCGCTGT ACGCGGCCTA TATCCCGTTC TTTGAAGAGG GCGGCATCTT CGTGCCCACG GCGCGCGAAT ACAAGCTGGG CGATGATGTG TACGTGCTGC TCACGCTGCC CGACGACCCG CAGCGCTACC CCGTGGCCGG CCGCGTGGCC TGGGTGACAC CCGCGCGCGC CGCGGGCAAC CGCACGCAGG GCGTGGGCAT CCAGTTCCCC AAGGACGAGA AGTCGCGCCA GCTCAAGCAC AAAATCGAGG AAGTGCTGGG CTCGGCCCTG GCGTCTGAAC GGCCTACGCA GACCATCTAA
|
Protein sequence | MSSPSTAPRP SVMQLNIKEK AALYAAYIPF FEEGGIFVPT AREYKLGDDV YVLLTLPDDP QRYPVAGRVA WVTPARAAGN RTQGVGIQFP KDEKSRQLKH KIEEVLGSAL ASERPTQTI
|
| |