Gene Ajs_1312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1312 
Symbol 
ID4673834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1380669 
End bp1381121 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content66% 
IMG OID639838424 
Productsingle-stranded DNA-binding protein 
Protein accessionYP_985608 
Protein GI121593712 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.314977 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGC ATTTTTCGGG CGAAGGCAAC ATCGGCTCGC CCCCCGAGTA CCGGGAGTTC 
CCCAACGGCA ACGACGAACC GCGGCGCTTG TTGCGGCTGA ACGTGTATTT CGACAACCCC
GTTCCCACCA AGGGCGGCGA CTATGAGGAT CGCGGCGGCT TCTGGGCGCC GGTGGAAATC
TGGCACCGCG ACGCCGCGCA CTGGAAGGAC CTCTACCAGA AGGGCATGCG CGTGCTGGTC
GTCGGCCGCA TGGAGCGCGA ACCCTGGACC GACAACGAGG ATCAGCCACG TGAGACTTGG
CAGATCAACG CGCGCAGCGT CGGCATCCTG CCGTTCCGCA TCGAGTCCGT CGTCCTGAGC
CCCAAATCGC AGGAGACCGC ACAGGACGCG CAGCCCAAGC CCCAGGCCGC CCAGGAACCG
GCTGCGCCGA AGGAGCCCAA GCGCAGGAAG TGA
 
Protein sequence
MSTHFSGEGN IGSPPEYREF PNGNDEPRRL LRLNVYFDNP VPTKGGDYED RGGFWAPVEI 
WHRDAAHWKD LYQKGMRVLV VGRMEREPWT DNEDQPRETW QINARSVGIL PFRIESVVLS
PKSQETAQDA QPKPQAAQEP AAPKEPKRRK