Gene Ajs_1194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1194 
Symbol 
ID4672511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1265522 
End bp1266298 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content67% 
IMG OID639838316 
Productexodeoxyribonuclease III Xth 
Protein accessionYP_985502 
Protein GI121593606 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.118144 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.796496 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATCG CCACCTGGAA CATCAATTCC CTCTCCGTGC GCCTGCCGCA GGTGTTGGCC 
TGGCTGGAGG CCAACCCCGT GGACGCCATC GGCCTGCAGG AGCTCAAGCT GGTGGACGAG
AAATTCCCGC ACGACGCCTT CGAAGCAGCG GGCTACCACG CGGTGTGCTT CGGCCAGAAG
ACCTATAACG GCGTGGCCAT CCTCAGCCGC ACGCCGCTGC GCGACGTGGT GCGCAATATC
CCGGGCCATG GTGACGAGCA GGCCCGCGTC ATCGCCGCTA CGCTGGATAC GCCTGAAGGC
CCGCTGCGCC TGGTGAACTG CTACTTTGTG AACGGCCAGG CGCCGGGGAC CGAGAAGTTC
AGCTACAAGC TGCTGTGGCT GGAAGCGCTG CGCGACTGGC TGCGCACCGA GCTGGCCGCG
CATCCGCGGC TGGTGCTGGT GGGCGACTTC AATGTGGCCC CCGAGGACCG CGACTCCTTC
GACCCCGTGG GCTTGAAGGA CACCATCCAC CACACGGTAG AGGAGCGCCA GCACTTCCAG
GACCTGCTGG GGCTCGGCCT GACCGACGCC TTCCGCCTGT TCGATCAGCC CGAGAAGAGC
TATTCGTGGT GGGACTACCG CATGCTGGGG TTTCAGAAGA ACCGCGGGCT GCGCATCGAC
CACATCCTGG TCAGCGCTGC GCTGCGGCCC TCCGTGACGG CCTGCCGCAT CGACCGCGCT
CCGCGCAAAA ATCCGCAGCC CAGCGACCAC GCGCCGGTCG TGGTGTCGCT GGGCTGA
 
Protein sequence
MQIATWNINS LSVRLPQVLA WLEANPVDAI GLQELKLVDE KFPHDAFEAA GYHAVCFGQK 
TYNGVAILSR TPLRDVVRNI PGHGDEQARV IAATLDTPEG PLRLVNCYFV NGQAPGTEKF
SYKLLWLEAL RDWLRTELAA HPRLVLVGDF NVAPEDRDSF DPVGLKDTIH HTVEERQHFQ
DLLGLGLTDA FRLFDQPEKS YSWWDYRMLG FQKNRGLRID HILVSAALRP SVTACRIDRA
PRKNPQPSDH APVVVSLG