| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1153 |
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| Symbol | |
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| ID | 4671866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 1214898 |
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| End bp | 1216688 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639838271 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_985462 |
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| Protein GI | 121593566 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.442479 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCTCC TGCTGTTGCT CTGGTGCGGA ATCTTGCCTG GCGGCGCGCG GCTGCGCGCG
GTGCTGGGCG GAATGCTGTG CCTGCTCGGC GCGCTGCGCC CCGGCCCGGC GCAGGCCTGC
AGAGCCACAG TGCTGGAGCC AGGCAGGGGC CCCGTGGATC TGTGGGCCCA CCTGTGCATG
CGCACCGACC CCACGCTGGC ACGCACGGTG CAGGAGATAC TGGCCACGCC CACGGCGTTC
GCGGCACCTG TGACGCGCGG CGGTTCACTG GGCGTGCGCC CGGATGCCGT GTGGCTGAAG
GCGACACTGG TCCCCCAGGC GCGCGCAGGG CCCTGGGTCA TCAATGTGGA CTTCCCGCTG
CTGAACGAAC TCGACGTCTA TCTGGTGGCG GACGGCGAGG TGCTGCAGCA CCACGCCCTG
GGCAACCTGC AGCAGCCCAG CCCCCACGCG CTGGATTGGC GCACCCCCGC GGTGGTACTG
GCGCTGGAGC ACGAACGCAC TTACGAGCTG CTGGTGCGCG TGCGCACAAT GGGCGGAATG
ATTGTCCCGC TGCGCATCGG CACCTGGCGC GACATGGCTG CGCCCATGCT GCGCGAGCAG
ATGCTGCAGG GCCTGTTCGT GGGCCTGGCG CTGTGCCTGT TCATCTACGG CCTGCTGCAG
GCCGTCGCGC TACGGGAAAA GGTGTTCGCC TACTACGCGC TGCTGGTGCT GGGCAGCGCG
GGGTTTTCCA TCCACTTCTT TGGCATCGGC ACCCTGTTCA TCTGGGGGCA CCACCCCTGG
ATGCAGCAGC ACGCCGGCCC GCTGTTCGTC TGCATTGCGG TGATCGGCGC CTTCTTGTTC
ATGGGGCACT CGCTGGCGCG CGACAACCGG CCCGGTCGAT TTCTGCGCAC CATGCAGGGA
GGAGCCGCGC TGTCCGTCCT GCTCTGCGCC GCGTTTCTGT CAAACGTTTT GAACACGCCC
GCGACCCTCG CCACGCTGGC ACTTCTGGGG CCGCTGCCGG CGTTGGTCAG CCTGCCCGTG
GCCGCGCGGC GCATGCACGA GAACGACCCC GTGAGGCACA CACTGCTGCT CGCATGGCTG
GCGTATATCG GCACCGCCGT CGCGCTCGCT CTGCTGGTGC ATGGGGAGCT CCCCGCCCGG
TTCTGGCCCA TGCACCTCTT CCAGATCGCA GCCGTGGTCA ACATGCTGCT GTTCATGCGC
ATGCTGGGCC TGCGCCACGC ACGCCTGCGT GACGCAGTGC AGGACGCCAG CCGGGAGCGC
GACGCGCTCA TGTCGCTGGC CCGCACCGAC CCCCTCACCG GCCTGCCCAA CCGGCGCGGC
CTGGACGCAG CCCTGGGCGC CGCGCTGCCC CACGCGCAAG CCGACCGGCT GCTGGCCGTG
TTTATGCTGG ACCTGGACGG CTTCAAACCC GTCAACGATC AGCATGGGCA CGCCGTGGGC
GACCGGCTGC TGGTGGCCGT GGCGCAGCGG CTGCGCGCCC ATTTGCGCCA CGCCGACCTG
ATCGCACGGC TGGGCGGGGA CGAATTCGTC GTCATGGCGC AGCAGCTGCC CAGCGTGATG
CAGGCGCACG ATCTCGGGAT CGCACTGCTG GAATCCTTCC TGACGCCGTT TTACGTGCAG
GGCGTCGAGA TCCGCGTGGG GTTGACGATC GGCTACGCAC TCGCGCCCGA CGACGCCTGC
GACGTCGGCA CCCTCATCCG CCTGGCGGAT GCCGCCATGT ACAGCGGCAA GCAGCGGGGC
AAGTTCTGCG TGCGCCGCAA CAAGGGGGAC CTGGCGCTGG CGTCGTCCTG A
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| Protein sequence | MRLLLLLWCG ILPGGARLRA VLGGMLCLLG ALRPGPAQAC RATVLEPGRG PVDLWAHLCM
RTDPTLARTV QEILATPTAF AAPVTRGGSL GVRPDAVWLK ATLVPQARAG PWVINVDFPL
LNELDVYLVA DGEVLQHHAL GNLQQPSPHA LDWRTPAVVL ALEHERTYEL LVRVRTMGGM
IVPLRIGTWR DMAAPMLREQ MLQGLFVGLA LCLFIYGLLQ AVALREKVFA YYALLVLGSA
GFSIHFFGIG TLFIWGHHPW MQQHAGPLFV CIAVIGAFLF MGHSLARDNR PGRFLRTMQG
GAALSVLLCA AFLSNVLNTP ATLATLALLG PLPALVSLPV AARRMHENDP VRHTLLLAWL
AYIGTAVALA LLVHGELPAR FWPMHLFQIA AVVNMLLFMR MLGLRHARLR DAVQDASRER
DALMSLARTD PLTGLPNRRG LDAALGAALP HAQADRLLAV FMLDLDGFKP VNDQHGHAVG
DRLLVAVAQR LRAHLRHADL IARLGGDEFV VMAQQLPSVM QAHDLGIALL ESFLTPFYVQ
GVEIRVGLTI GYALAPDDAC DVGTLIRLAD AAMYSGKQRG KFCVRRNKGD LALASS
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