| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1037 |
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| Symbol | |
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| ID | 4670784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 1080765 |
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| End bp | 1081700 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639838157 |
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| Product | farnesyl-diphosphate synthase |
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| Protein accession | YP_985349 |
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| Protein GI | 121593453 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.101791 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGTCCG CAGTGCCCTC TATGCCCGCC ACCCTTGTGC CTGACGCCGC CCCCGGGTTT
GACTTCAATG ACTGGATGCG TGCAGAGCTG GCGCGTGTTG AAGAAGCCTT GTCGCGCTGG
GTGTGCCACG ACGCACCGGC CGGTCTGGGC GAAGCCATGC GCTATGCGGT GCTGGACGGC
GGCAAGCGCC TGCGCCCGCT GCTGGTGCTG GCGGCTAGCC ACGCCGTGGG TGGTCAGCCC
GAGGCCGCGC TGCGTGCCGC CTGCGCGGTG GAGCTGATCC ACGCTTACTC TCTGGTGCAT
GACGACATGC CCTGCATGGA CAACGACGTG ATGCGCCGCG GCAAGCCCAC GGTGCATGTG
CGTTTTGGCG AGGCCCGCGC GCTGCTGGCG GGCGATGCGC TGCAGGCGCT GGCGTTTGAG
CTGCTCACAC CCGAGGACGG CGTACCCCTT GCCATGCAGG CGCGGCTGTG CCGCGAACTG
GCCCAGGCCG CCGGCGCCGC CGGCATGGCG GGCGGGCAGG CCATCGACCT GGCCAGCGTG
GGGCTGCAGC TGTCTGAAGA CCAGTTGCGC CACATGCATA GCCTCAAAAC CGGTGCGCTG
CTGCAGGCCA GTGTGGTGAT GGGTGCAGTC TGCGGACAGC CGACAGGCGC GGCGCTGCAG
GCGCTGACCG ACTACGGCGC GGCCATGGGC CTGGCTTTTC AGGTGGTGGA TGATGTGCTG
GATGTCACCC AGGACTCGGC CACGCTGGGC AAGACGGCCG GCAAGGATGC TGCCAGCGAC
AAGCCCACCT ATGTCTCGCT GATGGGGCTG CAGTCCGCCC GGGCCTATGC CGATGTGCTG
CATGCCCAGG CGCTGGCGGC ACTGGTGGCC AGCGGCCTGA CGGACACGCG GGCCCTGGCG
GCGTTGGCCG ACATGGTGGT GCGCCGCTCG CATTGA
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| Protein sequence | MMSAVPSMPA TLVPDAAPGF DFNDWMRAEL ARVEEALSRW VCHDAPAGLG EAMRYAVLDG
GKRLRPLLVL AASHAVGGQP EAALRAACAV ELIHAYSLVH DDMPCMDNDV MRRGKPTVHV
RFGEARALLA GDALQALAFE LLTPEDGVPL AMQARLCREL AQAAGAAGMA GGQAIDLASV
GLQLSEDQLR HMHSLKTGAL LQASVVMGAV CGQPTGAALQ ALTDYGAAMG LAFQVVDDVL
DVTQDSATLG KTAGKDAASD KPTYVSLMGL QSARAYADVL HAQALAALVA SGLTDTRALA
ALADMVVRRS H
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