Gene Ajs_0958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0958 
Symbol 
ID4673082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp999274 
End bp999753 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content62% 
IMG OID639838082 
ProductNADH dehydrogenase subunit B 
Protein accessionYP_985274 
Protein GI121593378 
COG category[C] Energy production and conversion 
COG ID[COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases 
TIGRFAM ID[TIGR01957] NADH-quinone oxidoreductase, B subunit 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.000268179 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTGAAG GTGTGATGAA GGAAGGCTTC ATCACCACGA GTTATGACTC CGTGGTGAAC 
TGGGCCAAGA CCGGATCCCT TTGGCCCATG ACCTTCGGAC TGGCCTGCTG CGCTGTCGAG
ATGATGCATG CTGCCGCCGC ACGTTATGAC CTGGGGCGTT TTGGCGCGGA AGTGTTCCGG
GCGAGCCCGC GACAGTCGGA CCTGATGATC GTGGCCGGCA CGCTGTGCAA CAAGATGGCG
CCCGCTCTGC GCAAGGTGTA CGACCAAATG GCCGAGCCGC GCTGGGTCAT CTCCATGGGC
TCTTGTGCCA ACGGCGGGGG CTACTACCAC TACAGCTATT CGGTGGTGCG TGGCTGTGAT
CGCATCGTCC CTGTGGATGT GTACGTTCCG GGTTGTCCTC CGACGGCCGA GGCGCTGATC
TACGGGATCA TCCAGCTGCA GCAGAAGATC CGCCGCACCC ACACCATTGC GCGCGCCTGA
 
Protein sequence
MIEGVMKEGF ITTSYDSVVN WAKTGSLWPM TFGLACCAVE MMHAAAARYD LGRFGAEVFR 
ASPRQSDLMI VAGTLCNKMA PALRKVYDQM AEPRWVISMG SCANGGGYYH YSYSVVRGCD
RIVPVDVYVP GCPPTAEALI YGIIQLQQKI RRTHTIARA