Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0730 |
Symbol | |
ID | 4673515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 769214 |
End bp | 770284 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639837853 |
Product | type IV pilus assembly protein PilM |
Protein accession | YP_985050 |
Protein GI | 121593154 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
TIGRFAM ID | [TIGR01175] type IV pilus assembly protein PilM |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGTCGT TGTTCAGTCG TCAGTCTGCC CCATTGCTGG GTGTGGACAT CAGCTCTTCC AGCGTCAAGC TGGTGGAGTT GGGACGAGAT AAGGGAGGGG CGCTGGTTCT CGAGTGCTGT GCAATCGAGC AACTGGAGCG TGGGTGGATC ACGGATGGCA ACATCGAAAA GTTCGATGAA GTCGCCGAGG CGTTGCGTCG CGTTGTGAAG AAGAGCGGGA CCAAAACCAA GAATGTCGCC CTTGCATTGC CATCCTCTGC TGTGATCACC AAGCGCATCA CGCTGCCCGG CGGGATGTCC GAGCAGGAAC TGGAAGTGCA GGTGGAATCC GAAGCCAACC AGTACATTCC TTTTTCGCTG GACGAGGTGA GCCTCGACTT CTGCGTGGTG GGCCCCAGCA AGAGCGCGCC AGGCGATGTC GACGTGCTGA TTGCGGCTTC TCGCAAAGAG AAGGTGCAAG ATCGTCAAGG TCTCGCGGAG GCGGCTGGAC TGAAACCCGT GGTCGTCGAC ATTGAGTCGC ATGCGGCACG CTTGGCAGCA GGGCGGCTGA TTGAAGGGTT GCCCAATCGG GGCGCCGATG CGGTCGTTGC CCTCTTTGAG GTGGGGGCAA TGACGACGAG CATGCAGGTC ATTCGGAATG ACGATGTCTT GTATGAACGC GACCAAGCCT TTGGTGGTGC GCAGTTGACC CAATTGATCG TGCGCCAGTA TGGGTTCTCA CAAGAAGAAG CGGAGGGCAA GAAGCGCAAT GGCGACTTGC CTGAGGACTA TCAATCTGCC GTCCTGCGCC CCTTCGTGGA CAGTCTCTCT CAGGAAATCA GCCGCGCGCT GCAGTTCTTC TTTACGAGCA CCCCATACAA CCGCGTGGAT CACATCATGC TCGCAGGCGG ATCTGCCCCT CTGCCCGGCT TGACGGAATC CGTCATTCAG AACACGGGGT TTGCGTGCAG CGTCATCAAC CCCTTTGATG GCATGGAAGT GGGCGGGGGG GTTCGCCTCA AAAAGATGGT GCGCGAGGCC CCGTCTTACT TGACCTCCTG TGGGCTGGCA ATGCGGAGGT TCCTGCAGTG A
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Protein sequence | MGSLFSRQSA PLLGVDISSS SVKLVELGRD KGGALVLECC AIEQLERGWI TDGNIEKFDE VAEALRRVVK KSGTKTKNVA LALPSSAVIT KRITLPGGMS EQELEVQVES EANQYIPFSL DEVSLDFCVV GPSKSAPGDV DVLIAASRKE KVQDRQGLAE AAGLKPVVVD IESHAARLAA GRLIEGLPNR GADAVVALFE VGAMTTSMQV IRNDDVLYER DQAFGGAQLT QLIVRQYGFS QEEAEGKKRN GDLPEDYQSA VLRPFVDSLS QEISRALQFF FTSTPYNRVD HIMLAGGSAP LPGLTESVIQ NTGFACSVIN PFDGMEVGGG VRLKKMVREA PSYLTSCGLA MRRFLQ
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