| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0641 |
|---|
| Symbol | |
|---|
| ID | 4673435 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 672116 |
|---|
| End bp | 674026 |
|---|
| Gene Length | 1911 bp |
|---|
| Protein Length | 636 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639837766 |
|---|
| Product | glucosamine--fructose-6-phosphate aminotransferase |
|---|
| Protein accession | YP_984963 |
|---|
| Protein GI | 121593067 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
|---|
| TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.325267 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGCGGCA TCGTCGGCGC GGTATCCACC CGCAATATCG TTCCCATCCT GGTGCAGGGC
CTGCAGCGGC TGGAGTACCG CGGCTATGAC TCCTGCGGCG TCGCCGTGCA CGAGGCGAGC
CTGGGCGAAA TGCCCGCGGG TAGCCTGCAC CGTGCGCGCA GCACTGCCCG CGTGGCCGAA
TTGCTGGCGC AGGTGAACCA TGAACACCTC CAAGGCGCCA CGGGCATCGC CCACACCCGC
TGGGCCACGC ACGGCGCCCC CGCCGTGCAC AACGCCCATC CCCATTTCAG CCATGGACCC
GGTGCCGCGC CGGCGCAGGC AGAGCGCCCC GGCCGCGTCG CGCTGGTGCA CAACGGCATC
ATCGAGAACC ACGAGGAGTT GCGCGCCGAG TTGCAGGCGC GCGGCTACGT GTTCTCCAGC
CAGACCGATA CCGAAGTCAT CGCGCATCTG GTGGACAGCC TGTACGACGG CGACCTGTTC
CAGGCCGTGC GCGCCGCGAC TGCGCGGCTG CACGGCGCAT TCGCCATCGC CGTGATCCAC
AAGGACGAGC CGCACCGCGT GGTGGGTGCG CGCGCGGGCT CGCCCCTGGT GCTGGGTGTC
GGTGAGGGCG AGCACTTCCT GGCCAGCGAT GCCATGGCCC TGGCCGGTGT GACCGACCAG
ATCGTGTACC TGGAAGAGGG CGACCTGGTG GACCTGCAAC TGGGCCGTTA CTGGATCACC
ACGGCCGACG GCCAGCCGCT GGACGCCGCC AGCCGCCCCG TGCGCACCGT GCACGCACAC
AGTGGTGCGG TGGAGCTGGG GCCCTATCGC CACTACATGC AAAAGGAAAT CTTCGAGCAG
CCGCGCGCCA TTGCCGACAC GTTGCACGGC CTGCAGGGCA TCGTGCCCGA GCTGTTCGAC
GGCGTGGGCC AGCCCGGGCA GCAGGGCGCG GCAGCCTGGC GTGTGTTCAA GGAGATCGAC
TCCGTGCTCA TCCTCGCCTG CGGGACCAGC TACTACAGCG GCTGCACCGC CAAGTACTGG
CTGGAGGGCA TCGCGGGCAT TCCCACCCAG GTGGAAGTGG CCAGCGAATA CCGCTACCGC
ACCAGCGTGC CCAACCCGCG CACGCTGGTG GTGACCATCA GCCAATCCGG CGAAACCGCC
GACACCCTGG CCGCACTGCG CCATGCGCAG AGCCTGGGCA TGCGCCACAC GCTCACCATC
TGCAACGTGG CCACCAGCGC CATGGTGCGC GAGTGCGAGC TGGCCTACGT CACCCGCGCC
GGCGTGGAGA TTGGCGTGGC GTCGACCAAA GCCTTCACCG CGCAGCTGGC GGGACTGTTC
CTGTTGACCC TGGCGCTGGC GCAGTCGCGC GGGCGCCTGA CCGAGGAGGC CGAGGGCAAC
TACCTGAAAG CCATGCGCCA CCTGCCCGCC GCACTGCAGG CCGTGCTGGC GCTGGAGCCG
CAGATCATCA GCTGGTCCGA GGACTTCGCG AAGAAGGAGA ACGCCCTGTT CCTGGGCCGC
GGACTGCACT ACCCCATTGC ACTGGAGGGT GCCCTCAAGC TCAAGGAGAT CAGCTACATC
CACGCCGAGG CGTACCCTGC GGGTGAACTC AAGCACGGCC CGCTGGCTCT CGTCACCAGC
AGCATGCCGG TGGTGACCGT GGCGCCCAAC GACGCGTTGC TGGAGAAGCT CAAGAGCAAC
ATGGAAGAAG TGCGCGCCCG TGGCGGCGTG CTCTACGTGT TGGCCGATGC CGATACCCAT
ATCGACAGCA GCGAAGGTCT GCACGTCATC CGCATGCCAG AGCACTACGG CGCCCTGTCG
CCGCTGCTGC ACGTGGTGCC GCTGCAACTG CTGGCCTACC ACACGGCCTG CGCGCGCGGA
ACGGATGTGG ACAAGCCCCG TAACCTGGCC AAGAGCGTCA CGGTGGAGTA A
|
|---|
| Protein sequence | MCGIVGAVST RNIVPILVQG LQRLEYRGYD SCGVAVHEAS LGEMPAGSLH RARSTARVAE
LLAQVNHEHL QGATGIAHTR WATHGAPAVH NAHPHFSHGP GAAPAQAERP GRVALVHNGI
IENHEELRAE LQARGYVFSS QTDTEVIAHL VDSLYDGDLF QAVRAATARL HGAFAIAVIH
KDEPHRVVGA RAGSPLVLGV GEGEHFLASD AMALAGVTDQ IVYLEEGDLV DLQLGRYWIT
TADGQPLDAA SRPVRTVHAH SGAVELGPYR HYMQKEIFEQ PRAIADTLHG LQGIVPELFD
GVGQPGQQGA AAWRVFKEID SVLILACGTS YYSGCTAKYW LEGIAGIPTQ VEVASEYRYR
TSVPNPRTLV VTISQSGETA DTLAALRHAQ SLGMRHTLTI CNVATSAMVR ECELAYVTRA
GVEIGVASTK AFTAQLAGLF LLTLALAQSR GRLTEEAEGN YLKAMRHLPA ALQAVLALEP
QIISWSEDFA KKENALFLGR GLHYPIALEG ALKLKEISYI HAEAYPAGEL KHGPLALVTS
SMPVVTVAPN DALLEKLKSN MEEVRARGGV LYVLADADTH IDSSEGLHVI RMPEHYGALS
PLLHVVPLQL LAYHTACARG TDVDKPRNLA KSVTVE
|
|---|
| |