Gene Ajs_0620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0620 
Symbol 
ID4674338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp653220 
End bp654059 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content69% 
IMG OID639837746 
Product5,10-methylenetetrahydrofolate reductase 
Protein accessionYP_984943 
Protein GI121593047 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0685] 5,10-methylenetetrahydrofolate reductase 
TIGRFAM ID[TIGR00676] 5,10-methylenetetrahydrofolate reductase, prokaryotic form 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.302969 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTTT CCACGACCTT TCCGGTCAGC TTTGAATTCT TCCCGCCCAA GACGCCCGAG 
GGCGCCGACA AACTGCGCGC CGTGCGCCAG CAGCTGTATG CGCGCCGGCC CGAGTTCTGC
TCCGTCACCT ACGGCGCGGG GGGCTCCACG CAGGCGGGCA CCTTCGGCAC GGTGCGCGAG
ATCCTTGCCG AGGGCGTGAG CGCGGCCTCG CACTTCTCGT GCATCGGCGC CACCAAGGAC
GGCGTGCGCG CGCAGCTCGC CGAGCTGAAA GCCATGGGGG TGAAGCGCCT GGTTGCGCTG
CGCGGCGACC TGCCCAGTGG CTACGGCATC GGGGGCGAGT TCCATTACGC GAGCGATCTG
GTGGCGTTCA TCCGCGCCGA GACGGGGCGC GACTTCCACA TCGAGGTGGC GGCCTACCCC
GAGGTCCATC CCCAGGCCCG TTCGTCGGAT GCCGACCTGC AGGCCTTTGC CACCAAGGTG
CGCGCGGGCG CCGACTCGGC CATCACACAG TACTTCTTCA ATGCCGACGC CTACCTGCGC
TTCGTGCAGG ACGTGCGCCG CCTGGGGCTG GACGTGCCCG TGGTGCCGGG CATCATGCCG
ATCATGGGCG CGTCACAGCT GCTGCGCTTT TCGGACGCCT GTGGCGCCGA GATCCCGCGC
TGGATCCGCC TGCGCCTGCA GGGCTATGGT GACGATGTGG CGAGCATTCG CGCCTTCGGC
CTGGATGTCG TCACGCACCT GTGCGAGCAA CTGCGCCGCG AGGGCGTGCC GGGCCTGCAC
TTCTACACCA TGAACCAGAG CGCGGCCACG TTGGAAATCT GCGACCGCCT GGGGCTCTGA
 
Protein sequence
MSLSTTFPVS FEFFPPKTPE GADKLRAVRQ QLYARRPEFC SVTYGAGGST QAGTFGTVRE 
ILAEGVSAAS HFSCIGATKD GVRAQLAELK AMGVKRLVAL RGDLPSGYGI GGEFHYASDL
VAFIRAETGR DFHIEVAAYP EVHPQARSSD ADLQAFATKV RAGADSAITQ YFFNADAYLR
FVQDVRRLGL DVPVVPGIMP IMGASQLLRF SDACGAEIPR WIRLRLQGYG DDVASIRAFG
LDVVTHLCEQ LRREGVPGLH FYTMNQSAAT LEICDRLGL