Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0611 |
Symbol | |
ID | 4674493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 643834 |
End bp | 644505 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639837737 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_984934 |
Protein GI | 121593038 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTGA ATATCGATTG GTCCTTCTTC ACCTGGGAGC TGTTCAGCAA CTTCGTGATC AAGGGGCTGT ACTTCAGCCT GGTGCTGACG GTGATCGCCA CCGTGGGCGG CATCCTGCTG GGCACGGTGC TGGCGCTCAT GCGCCTGTCG GGCAAGAAGT GGCTGGACGT GCCGGCCACC ATCTATGTCA ACGGCATGCG CTCGATTCCG CTGGTGATGG TGATCCTGTG GTTCTTCCTG CTGGTGCCCA TGATCATCGG TCGCCCCATC GGCGCCGAGG TGTCGGCGGT GGTGACCTTC ATCGCCTTCG AAGCCGCCTA CTTCAGCGAG ATCATGCGCG CAGGCATCCA GTCCATCCCG CGCGGCCAGG TGTTCGCGGG GCAGGCGCTG GGCATGACCT ACGGGCAGAA CATGCGCCTG GTGGTGCTGC CGCAGGCCTT CCGCAACATG CTGCCGGTGC TGCTCACGCA GACCATCATC CTGTTCCAGG ACACGTCGCT GGTGTACGCC ATCGGTGCCT ACGACATGCT CAAGGGCTTC GAGATCGCGG GCAAGAACTA TGGCCGCCCG ATCGAGGCCT ACCTGGCCGC GGCCGTGGTC TATTTCATCC TCTGCTACGC GCTGTCCTGG CTGGTCAAGC GCCTGCACAA GAAGATCGCC ATCATTCGCT GA
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Protein sequence | MNLNIDWSFF TWELFSNFVI KGLYFSLVLT VIATVGGILL GTVLALMRLS GKKWLDVPAT IYVNGMRSIP LVMVILWFFL LVPMIIGRPI GAEVSAVVTF IAFEAAYFSE IMRAGIQSIP RGQVFAGQAL GMTYGQNMRL VVLPQAFRNM LPVLLTQTII LFQDTSLVYA IGAYDMLKGF EIAGKNYGRP IEAYLAAAVV YFILCYALSW LVKRLHKKIA IIR
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