Gene Ajs_0601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0601 
Symbol 
ID4673905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp633980 
End bp634411 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content66% 
IMG OID639837727 
Productthioesterase superfamily protein 
Protein accessionYP_984924 
Protein GI121593028 
COG category[I] Lipid transport and metabolism 
COG ID[COG1607] Acyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.71789 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCAGG ATCGCCCCGC CTCCCACACC CAGCTGCCCG CCGACAAGGA ACTGGTACTC 
AAGGTGATAC CCATGCCCGC CGACACCAAC GGCAATGGCG ACATCTTCGG CGGCTGGGTC
ATGGCGCAGG TGGATCTGGC CGGCTCCGTG CTGCCCGCGC GGTACATCCG CGGCCGCATG
GCCACGGTGG CGGTGAACGA ATTCATCTTC AAGCAGCCCG TGCGCGTGGG CGACCTGCTG
TCGTTCTTTG CCGAAGTCAC GCGCATCGGC AACACCTCCA TGACCGTGCA GGTGGAGGTC
TATGCCGAGC ACATCCGCAC CCAGGGCAGC TACGTGAAGG TGACCGAGGC GTCGCTGACC
TATGTGGCCA TCGACGAAAA CGGCCGCCCG CGCCCCATTC GGAAGCCGGG CGACGAAAGC
GTCGCGCCGT AA
 
Protein sequence
MSQDRPASHT QLPADKELVL KVIPMPADTN GNGDIFGGWV MAQVDLAGSV LPARYIRGRM 
ATVAVNEFIF KQPVRVGDLL SFFAEVTRIG NTSMTVQVEV YAEHIRTQGS YVKVTEASLT
YVAIDENGRP RPIRKPGDES VAP