| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0487 |
|---|
| Symbol | |
|---|
| ID | 4672301 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 506772 |
|---|
| End bp | 508217 |
|---|
| Gene Length | 1446 bp |
|---|
| Protein Length | 481 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639837617 |
|---|
| Product | CRISPR-associated Csy1 family protein |
|---|
| Protein accession | YP_984814 |
|---|
| Protein GI | 121592918 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02564] CRISPR-associated protein, Csy1 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0215342 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGAATCGC ACCGAGAAAC TACCGAGCGC TGTCAGCGAA TACGCTTAGC GATGCACGAA
CATGTCGCGC ATCGCCTCGC CCATGCTCTT AGAAAACTGC AAGGCAAAGA TGACGCAGCT
GCAAAGCAGC GCCGAATAGA AGCTCAAGAA AAGTACCAAT TGGTGCACAT ACTTGAACGC
GGAGTTCGCA CTGTTGAGCA AATCGCCGTA GCGAGCCACA TCGCAAAAGG CGTACACCCC
GACTTGCCCG TAAAGAAGAC GACAAACCTT GCCGTCGATT TTTCAAGCCT GCCAATGGTG
GACGTTGTCG GTTCACACGT TCTATCGAAG CGAGATGGGT TACACGACAC GACTGGCAAT
GGCTCCTACA ACTCCGCTGC ATACGAGCTG TATCTGCTGC TGGAATGTCG CGTTGAGGGG
CAGAAACTTA TTGATCTGTT GCGACTTGAA GATCCAGACG CGACTGAGGC TGTGAACTCT
TCTGCGCAAC TAGACAACGC TGCAGCTCTG TGCATTCAAC TACTAGAGCC CAAGTGCACA
GCGGTGTCGG CCAACACGTT GAGCAAGCAG ATCTACTGGC TAACAGGCCC CGACGCCAGC
GACGACACGC ACTACACCCT GCTGGCCCCG CTGTACGCCA CATCGCTCGC ACATGCGGTG
CATGCCCAGG TACAGGAAGA CCGCTTTGGC GAGGCCAACA AGGCTGCCCG CCAGGCGCGG
CGCGAGCGCA AGATGCATGA CGGCGTATTC CACGACTACC CCGGCCTGGC CGTGCAGAAC
ATGGGCGGCA CCAAGCCGCA GAACATCAGC CAGCTCAACA GCGAGCGCCG GGGCGTGAAC
TATCTACTGT CGTCGCTGCC GCCGCAGTGG CAAGCCAGCG CAGTGCGGCT GCCGGTGCAT
GCGACTTCGG TGTTTGACCG CCTGTTCATC GCCCGGCCCG AGGTGCGCCG CACGGTGCGG
GCGCTGCGGG TGTTTTTGGA GTCCAACCCC GACGCCAATC TGGCCACCCG TGATCGGCGC
GAGGAACTGC TCGACGCGCT GGTGGACGAG CTGGTGTCGC TGGCCGCCGA GTTGCAACAG
ATGCTGCCAC CGGGCTGGAG CCGGGATGAC CAGCGCTTTA AAGAACTGGC CTACGAAGAG
GCGCTTTGGC TGGACCCTCT GCGCGCAGAG ATACCCGAGG AAGCCCAGTT TGCACATGAC
TGGCAGTACA TGGACTGGCC CGCAGCCATC GGCAAAGCCT TTGCCGGCTG GCTCAACGCG
CAATTGCGCG ACAAGCTACC CGTGGGTGAT GCCGAAGCAC GCGAGTGGAA GAAGGTGCTT
CTGACTGACG AGGACGGGTT CAAGCAGCAG TTGCGCGAAT TGCGCAACAA GCTGGATGCG
CCCCACTACA TCCCCATCCG CAAAACGCAT GCGGAACTGG TAGCACTGCG GGAGGAGAAC
CCATGA
|
|---|
| Protein sequence | MESHRETTER CQRIRLAMHE HVAHRLAHAL RKLQGKDDAA AKQRRIEAQE KYQLVHILER
GVRTVEQIAV ASHIAKGVHP DLPVKKTTNL AVDFSSLPMV DVVGSHVLSK RDGLHDTTGN
GSYNSAAYEL YLLLECRVEG QKLIDLLRLE DPDATEAVNS SAQLDNAAAL CIQLLEPKCT
AVSANTLSKQ IYWLTGPDAS DDTHYTLLAP LYATSLAHAV HAQVQEDRFG EANKAARQAR
RERKMHDGVF HDYPGLAVQN MGGTKPQNIS QLNSERRGVN YLLSSLPPQW QASAVRLPVH
ATSVFDRLFI ARPEVRRTVR ALRVFLESNP DANLATRDRR EELLDALVDE LVSLAAELQQ
MLPPGWSRDD QRFKELAYEE ALWLDPLRAE IPEEAQFAHD WQYMDWPAAI GKAFAGWLNA
QLRDKLPVGD AEAREWKKVL LTDEDGFKQQ LRELRNKLDA PHYIPIRKTH AELVALREEN
P
|
|---|
| |