Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0259 |
Symbol | |
ID | 4672352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 273793 |
End bp | 274539 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639837390 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_984589 |
Protein GI | 121592693 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00759419 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGACAAGA TTGTTCTGAT CACCGGCGGC AGCCGGGGCA TCGGCGCTGC CGCCGCCGTA CTGGCCGCGC AGCGCGGCTG GGCCGTGGCC ATCAACTACC TGCGCCACGC CGAGGCCGCG AACGGCGTGG TGCGCCAGAT CGAGGCCGCG GGCGGGCGCG CCATCGCGGT GCAGGCCGAT GTGGCGGTGG AGGCCGACGT AGTGACTTTG TTCGAGACCG TGGACCACCG CCTGGGGCGC CTCACGGCAC TGGTGAACAA CGCGGGCGTG GTGGACCGCC CTGCCCCCGT GGACGAAATG CACGGCGAGC GCCTGCGGCG CATGTTCAGC ATCAACGTGC TGGGCGCCTT CTACTGCGTG CGCGAGGCGG TGCTGCGCAT GAGCACGCGC CATGGCGGTG CCGGTGGCAG CATCGTCAAC GTGTCCAGCA TCGCGGCCCG GCTGGGTGCA CCCCATCAGT ACGTGGACTA TGCGGCGTCC AAGGGCGCGC TGGACACGCT CACCATAGGC CTGGCGCACG AGGTGGGCGG CGAGGGCATC CGCGTGAATG CCGTGCGCCC CGGCCTGATC GACACCGATA TCCACGCCAG CGGCGGCCTG CCCCACCGCG TGCGCGACCT GGCAGGCCAG GTGCCCATGG GGCGCGGCGG CACGCCCGAG GAAGTGGCCG AGGCCATCGT GTGGCTGATG TCGGACGCGG CCAGCTACAC CTCGGCCACG CTCATGGACA TTGCCGGGGG CCGCTGA
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Protein sequence | MDKIVLITGG SRGIGAAAAV LAAQRGWAVA INYLRHAEAA NGVVRQIEAA GGRAIAVQAD VAVEADVVTL FETVDHRLGR LTALVNNAGV VDRPAPVDEM HGERLRRMFS INVLGAFYCV REAVLRMSTR HGGAGGSIVN VSSIAARLGA PHQYVDYAAS KGALDTLTIG LAHEVGGEGI RVNAVRPGLI DTDIHASGGL PHRVRDLAGQ VPMGRGGTPE EVAEAIVWLM SDAASYTSAT LMDIAGGR
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