Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0242 |
Symbol | |
ID | 4672181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 257100 |
End bp | 259040 |
Gene Length | 1941 bp |
Protein Length | 646 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639837373 |
Product | peptidoglycan glycosyltransferase |
Protein accession | YP_984572 |
Protein GI | 121592676 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
TIGRFAM ID | [TIGR03423] penicillin-binding protein 2 |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGAAC TGCGCAATGC CGAGGCCGAT GTCTGGCACT TTCGCCTGCG CGTGTTCGTC GTGGGCGTGG TGGTGCTGCT GGCATTCCTG CTGATCGTCG CGCGCCTGGT GGTGCTGCAG GTGGTGCGCC ACGAGGACCT CGCGGACCAG GCCGAGAGCA ACCGCACGGC GGTCGTGCCC ATCGTGCCCA ACCGCGGCCT CATCCTGGAC CGCAACGGCG TGGTGCTGGC CACCAACTAC TCGGCATACA CGCTGGAGAT CACGCCCTCG CGGACCATGG ACCTGGAGGC GACGATCGAC GCGTTGGCCG AGGTCGTGGA CATCCAGCCG CGCGACCGGC GCCGCTTCAA GCGTCTGCGC GAGGAGTCGC GCAGCTTTGA CTCCCTGCCC ATTCGCACAC GGCTGTCGGA CGAAGAGGTG GCGCGCTTTG CGGCGCAGCG CTACCGCTTC CCCGGCGTGG ACATCAAGGC GCGGCTGTTT CGCAACTACC CGCTGGGCGA GGTGGCGAGC CACGCGATCG GCTACATCGA CCGCATCAAC CAGCGCGAAA AGGAGCGCAT CGAGGACTCG GACGATGCGG CCAACTACCG CGGCACGGAC TACATCGGCA AGCTGGGGGT GGAGCAGAGC TTCGAATCCA CGCTCCACGG CCAGACGGGG TTCGAGCGCA TGGAGACCTC GGCCGGCGGG CATGCCGTGC GGCGCCTGAA CAGCCACCCG GCGACGCCGG GCAACACGGT GATGCTGTCG CTGGACATCA AGCTGCAAAA GCTGATCGAA GATATGTTCG GCGAGCGCCG CGGCGCTCTG GTAGCGCTGG ACCCGCGCAA CGGCGAGGTG CTGGCGCTGG TGTCCAAACC CACGTTCGAC CCCAACCTGT TCGTCGAGGG AATCGACCAG GAAAACTGGC AGGCGCTCAA CGAGTCCATC AACAAGCCGC TGCTCAACCG CGCGCTGCGC GGCACCTACC CTCCCGGCTC CACCTACAAG CCCTTCATGG CGCTGGCCGC GCTGGAGCTG GGCAAGCGCA CGGCGGGGCA GGTGTTCAAC GACCCGGGCT ATTACAACTA TGGCGGGCGC ACCTTCCGCA GCCACGAAGG CGGCCTGGGC GGCGTGGACA TGCACCGCGC CATCCAGTAT TCGAGCAACA CCTATTTCTA TTCGCTGGCC GTGGAGATGG GTGTGGACGC CATCCACGAC TTCATGAAGC CGCTGGGCTT CGGGCAGATC ACCGGCATCG ACCTCGGGGG CGAAGTGCGC GGCGTGCTGC CCAGCACCGA GTGGAAGCGC AACACCTACA AGCGCCCGGA GGCCAAGCGC TGGTACTCGG GCGAGACAGT GTCGCTGGGC ATCGGCCAGG GCTACAACAA CTTCACCATG CTGCAGCTGG CCGTGGCCGA GGCCACGCTG GCCAACGGCG GCACCCGCCA CCGTCCGCAC CTGATCAAGG CCGTGAAAGA CCAGGTGGGC GGGCAGGTGA CCGAGGTGCA GCAGCCCCCT GGCGAGCGCC TGGGCTACAA CCCCAAGCAT GTGGCGATCG TGAACAACGC GCTGATGGCC GTGAACCAGG CGGGCACGGG GCGGCGCGTG TTCGCGGGCG CGCCCTACAC CTCGGCGGGC AAAACCGGTA CGGCGCAGGC GGTGAGCCTG GGGCAGAACG TGCGGTACAA CGCCAAGCTG CTGGAGGAGC ACCAGCGCGA CCATTCCCTG TTTGCCGCGT TCGCGCCCGT GGAGGAGCCC CGCATCGCCG TGGCCGTGAT CGTGGAGAAC GCGGGCTTTG GCGCGGCGGC GGCGGCGCCC ATCGTGCGCC GCGTGTTCGA CTACTGGCTG CTGGGCCAGT ACCCGAGCGA GCAAGACCTG GCGGCCGTCT CCAAGGGGCA GGCCGGTGCT CCCATGGGCA CGCCGCGCAA CGTGGCGGAC GTGCCGCTCG CGATGCCCTG A
|
Protein sequence | MTELRNAEAD VWHFRLRVFV VGVVVLLAFL LIVARLVVLQ VVRHEDLADQ AESNRTAVVP IVPNRGLILD RNGVVLATNY SAYTLEITPS RTMDLEATID ALAEVVDIQP RDRRRFKRLR EESRSFDSLP IRTRLSDEEV ARFAAQRYRF PGVDIKARLF RNYPLGEVAS HAIGYIDRIN QREKERIEDS DDAANYRGTD YIGKLGVEQS FESTLHGQTG FERMETSAGG HAVRRLNSHP ATPGNTVMLS LDIKLQKLIE DMFGERRGAL VALDPRNGEV LALVSKPTFD PNLFVEGIDQ ENWQALNESI NKPLLNRALR GTYPPGSTYK PFMALAALEL GKRTAGQVFN DPGYYNYGGR TFRSHEGGLG GVDMHRAIQY SSNTYFYSLA VEMGVDAIHD FMKPLGFGQI TGIDLGGEVR GVLPSTEWKR NTYKRPEAKR WYSGETVSLG IGQGYNNFTM LQLAVAEATL ANGGTRHRPH LIKAVKDQVG GQVTEVQQPP GERLGYNPKH VAIVNNALMA VNQAGTGRRV FAGAPYTSAG KTGTAQAVSL GQNVRYNAKL LEEHQRDHSL FAAFAPVEEP RIAVAVIVEN AGFGAAAAAP IVRRVFDYWL LGQYPSEQDL AAVSKGQAGA PMGTPRNVAD VPLAMP
|
| |