Gene Ajs_0111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0111 
Symbol 
ID4671381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp123762 
End bp124550 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content68% 
IMG OID639837243 
Productregulatory proteins, IclR 
Protein accessionYP_984442 
Protein GI121592546 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.905367 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGTGA ACGCAGATCC GGACGGCAAA CTGGTCAGCG CCCTGGTGCG TGGCGTTTCC 
ATATTGCGGT GCTTTTCCAA CAAGACGCAG GAACTCAGCG CCAAGGAGCT GATGGACTTG
ACCGGGTTAC CGAAGCCCAC GCTGTTTCGC CTGACGGATA CGCTGTGCGA GCTGGGCCTG
CTGCGCTACT CGGAGCGCCT GTCCAAGTAC GTGCCGGGCC TGGGCCTGCT GCAGTTGTCC
TCGCCCGTGC TCACGCGCAT GGCCCTGCGC CAGTTTGCGC GCCCGCACAT GCAGGCGCTG
GCCGACCTGA CCGAGGGGCA GGTGCAGCTG GCCGTGGGCC ACAAGCGCCG GCTGTGCATG
GTGGAGCTGG CCAACGGCAT GGGCAACACC GTGTTCCGCC AGGAAATCGG CGTGCCCATC
TCGCTGTCGC GCACGGCCAC GGGCCGCGCC TACCTGCTGG GCATGGCCGA GGATGAGCGC
AAGGCCTACC TCCAGGACCT GCAGCGCAAC GAACCGCAGC GCGCCGCGTG GCTGGAGCAG
CGACTGACGG ACGCACGCGA CGACTTTGCG CGCCACGGCT TCTGCCGCAG CCACGGCGAC
CTGCACCGCG AGATCGAATC CATCGCCGTG CCCATGTCGC AGCCTCAGGA CGGGGAACTC
TGGGTGTTCG CCGCCTCGGT GCCGGTGTTC AGCCCCATGT ACGCCCGGCT GGAGACAGAC
CTGGGCCCGC GCCTGCGCAC GCTGGTGCGC TCGGTGGAGA GCGTGCTCGG GGCCTCCGGC
CTCACCTGA
 
Protein sequence
MNVNADPDGK LVSALVRGVS ILRCFSNKTQ ELSAKELMDL TGLPKPTLFR LTDTLCELGL 
LRYSERLSKY VPGLGLLQLS SPVLTRMALR QFARPHMQAL ADLTEGQVQL AVGHKRRLCM
VELANGMGNT VFRQEIGVPI SLSRTATGRA YLLGMAEDER KAYLQDLQRN EPQRAAWLEQ
RLTDARDDFA RHGFCRSHGD LHREIESIAV PMSQPQDGEL WVFAASVPVF SPMYARLETD
LGPRLRTLVR SVESVLGASG LT