Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0111 |
Symbol | |
ID | 4671381 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 123762 |
End bp | 124550 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639837243 |
Product | regulatory proteins, IclR |
Protein accession | YP_984442 |
Protein GI | 121592546 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.905367 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACGTGA ACGCAGATCC GGACGGCAAA CTGGTCAGCG CCCTGGTGCG TGGCGTTTCC ATATTGCGGT GCTTTTCCAA CAAGACGCAG GAACTCAGCG CCAAGGAGCT GATGGACTTG ACCGGGTTAC CGAAGCCCAC GCTGTTTCGC CTGACGGATA CGCTGTGCGA GCTGGGCCTG CTGCGCTACT CGGAGCGCCT GTCCAAGTAC GTGCCGGGCC TGGGCCTGCT GCAGTTGTCC TCGCCCGTGC TCACGCGCAT GGCCCTGCGC CAGTTTGCGC GCCCGCACAT GCAGGCGCTG GCCGACCTGA CCGAGGGGCA GGTGCAGCTG GCCGTGGGCC ACAAGCGCCG GCTGTGCATG GTGGAGCTGG CCAACGGCAT GGGCAACACC GTGTTCCGCC AGGAAATCGG CGTGCCCATC TCGCTGTCGC GCACGGCCAC GGGCCGCGCC TACCTGCTGG GCATGGCCGA GGATGAGCGC AAGGCCTACC TCCAGGACCT GCAGCGCAAC GAACCGCAGC GCGCCGCGTG GCTGGAGCAG CGACTGACGG ACGCACGCGA CGACTTTGCG CGCCACGGCT TCTGCCGCAG CCACGGCGAC CTGCACCGCG AGATCGAATC CATCGCCGTG CCCATGTCGC AGCCTCAGGA CGGGGAACTC TGGGTGTTCG CCGCCTCGGT GCCGGTGTTC AGCCCCATGT ACGCCCGGCT GGAGACAGAC CTGGGCCCGC GCCTGCGCAC GCTGGTGCGC TCGGTGGAGA GCGTGCTCGG GGCCTCCGGC CTCACCTGA
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Protein sequence | MNVNADPDGK LVSALVRGVS ILRCFSNKTQ ELSAKELMDL TGLPKPTLFR LTDTLCELGL LRYSERLSKY VPGLGLLQLS SPVLTRMALR QFARPHMQAL ADLTEGQVQL AVGHKRRLCM VELANGMGNT VFRQEIGVPI SLSRTATGRA YLLGMAEDER KAYLQDLQRN EPQRAAWLEQ RLTDARDDFA RHGFCRSHGD LHREIESIAV PMSQPQDGEL WVFAASVPVF SPMYARLETD LGPRLRTLVR SVESVLGASG LT
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