Gene Afer_1996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1996 
Symbol 
ID8324096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp2110440 
End bp2111162 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content70% 
IMG OID644953122 
ProductRhodanese domain protein 
Protein accessionYP_003110572 
Protein GI256372748 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2897] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTGGGC CTCCGAAGCC ACCGACATCG GCCGAAGTCC TTGCCGCACG AGCTCCGCAT 
GTCCCGAGGA TGCACTGGTC TCGGATCGAA CCATTGTGTG GTTTGCCGTC CGTACCGCGC
TTCCAAGCTT GGTCGACACC ACATCCCCGA CCCGCATGCG GTGGTTGGTG CCCTCGCCAC
CTTCGGCGTT GCCCCCAGCG CGACCGTGCG GGCAACAATC CCCGACCGGC TCGGCAGCTT
GCCGGTGGCG ACCCCTCGAC GCACGAGCGC TACCTCGGCC AGAGCGAGCC CATCGACCCC
CGAGCCGGCC ACATCCCTGG AGCTCGCTCG CTCCCGATCG ACGAGGTGGC CGCGACCGGT
CGCTTCCCAG ATCCCGCGAC GGCACGCAGG ATCCTCGGCC CCGTGGGCGA TCGCGAGATC
GTCGCCTCCT GTGGATCGGG CATCACGGCG TGCGTCCTCA TCGCACTCGC ACGACGCGCG
GGACGTGACG CCCGGCTGCT CGAGGGTTCG TGGTCAGGGT GGTGCGAGGA TCCCGCACGC
CCGGTCTGCC GCTCGGTCTG CGGCGATGAG CTCACATCGA GCCAGAGGCG CACGACACTG
AGACAGCGCG GCTCGAGACA CCGGACCGGT CGCTCACGGC ACCGATCGAC GCCTGGCCCG
AAGGTGGCAT CGCAATCGGC GCATCGAGAT CGCCGGCCGC CACCTGCGGG GGCAACCCCG
TGA
 
Protein sequence
MRGPPKPPTS AEVLAARAPH VPRMHWSRIE PLCGLPSVPR FQAWSTPHPR PACGGWCPRH 
LRRCPQRDRA GNNPRPARQL AGGDPSTHER YLGQSEPIDP RAGHIPGARS LPIDEVAATG
RFPDPATARR ILGPVGDREI VASCGSGITA CVLIALARRA GRDARLLEGS WSGWCEDPAR
PVCRSVCGDE LTSSQRRTTL RQRGSRHRTG RSRHRSTPGP KVASQSAHRD RRPPPAGATP