Gene Afer_1977 details

Gene Information

• Locus tag: Afer_1977
• ID: 8324077
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidimicrobium ferrooxidans DSM 10331
• Kingdom: Bacteria
• Replicon accession: NC_013124
• Strand: -
• Start bp: 2083700
• End bp: 2085667
• Gene Length: 1968 bp
• Protein Length: 655 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 644953103
• Product: hypothetical protein
• Protein accession: YP_003110553
• Protein GI: 256372729

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.0308729
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAAGGA GTCCGTGGAA GCGCCGCTGG GGCGTTGCGA GTGGCGGCGT GGTCGCCGCT 
TCTGCGCTGC TCGCCCTCGC GGGCGTCTCG AGTTCAGCGC TCGTTGCGCA GACGAGTCCG 
ATGGGCAATC TGTTCCCCCA GCTCGCCAAC GTGAAGGTCG GGTCCGCGAC AGCGTCGAAC 
AACGATACGA ATCCCTACGG CGTCGCCGTC GTACCGAAGA CGATGGGCAA TCTCGTCGCA 
GGCGACGTGC TCGTGGCAGA TTTCAACTCG TCGGCCGGCA CGTTCGGTGC TGGGACGAGC 
ATCGTCGAGG TCAACCCCAC GACCGGTCAA TCGACCACCT TCTACCAGAA CGCCGACATC 
ACCGGACCGG TGGGGATCGC CATCAACCCC TCGAACGACA TCGTCTGGGT CGGCTACTGG 
GGGAGCACAG CGAACGGTTC AGGTTCTGGG TATGCGGTGA TCAACTCCTC GGGCACGCTG 
ATTGCGAACT ACACGAGCAC AAACTCGACC TTCGCGGGCG TTTGGGGGGC CGCGGTCGCA 
CCGGGTGCCT TCTTCTGGTC GAACGTCGCC GTGTCGAACA CCGGCGCTGA CGGACAGGTG 
TGGCGGCTCA ACCCCAACCC GACCGGCACG TCCAACGGCC AGCCGCTGAA CGCCACCTAC 
ACGGCGCTCG CGACAGGGCT CCCGACCAAC TCCAACGTCT CCGGTGGTGA AACCGCGTCC 
AATGCCGGTG GGCCTCAGGG CATGGTGTAT GACCCGGCGA ACGGGATGCT CTACGTCGCC 
GACGACGTGA ACAACACCAT CTATGCGATT CCGAACGCGC TGACCGCGAC GACGCCGCAG 
ACCCCCATGG TCGTGTCGCA GAGCCCACTC CTGCAGTCGC CGCAGAACAT CGCGATCAAT 
CCGCAGAACG GCGATCTTCT CGTCGTGAAC GGTGCGACGA ACAACGACCT GCTCGAGATC 
AACCCGATGA ACGGGATGGT CGTCGCGACC CGAGTGCTCG ACACCGGCGC TGCCGGCGGC 
CTCTTCGGCC TCGCCACCGC GACGAACGCG ATGGGTCAGC TGCAGGTCTA CTACGACGAC 
TCGAACTCCT CGACGCTGAA CGCCCTGATG GCGCCGAACA CCGCGTACGG TTCGTACGCG 
TTCGTGCGGG GCAATGGGCA CGTGTCGAGC TTCGGTCCGC TGGGTACTGG CCAGCCGGCG 
GCACCCGCGA GCGGTGTCGT GGGCTATGCG CCTGACCCCG CCATGGCCGG TGCGGGCTGG 
GAGGTTACGG CGAGCGGCAT GGTGATGTCG GTGGGTGGCG CGCCCAGCTA CGGATCGGTG 
CAAACGGCTG GCGTGACGCA TCTCGCCGCC CCCATCGTCG GCATCGCCTC CACCCCCGAC 
GGCATGGGCT ACTGGCTGGT GGGCGCTGAC GGCGGCGTGT TCGCCTTCGG TGATGCGCAC 
TACATGGGGA ACACCTACAC GGACGGCCTG ACGGGGCTCG GTGGAGCTCA CCCGCTCGCC 
GCCCCCATCG TCGGCATCGC CTCCACCCCC GACGGCATGG GCTACTGGCT GGTGGGCGCT 
GACGGCGGCG TGTTCGCCTT CGGTGATGCC GAGTACATGG GGAACACCTA CACGGACGGC 
CTGACGGGGC TCGGTGGAGC TCACCCGCTC GCCGCCCCCA TCGTCGGCAT CGCCTCCACC 
CCCGACGGCA TGGGCTACTG GCTGGTGGGC GCTGACGGCG GCGTGTTCGC CTTCGGTGAT 
GCGCACTACA TGGGGAACAC CTACACGGAC GGGCTCACCG GCTTGCACGG AGCTCACCCG 
CTCGCCCAAC CGGTGATCGG CCTCGTGCCC ACCCCCGACG GCATGGGCTA CTGGCTCCTC 
GCGGCTGACG GCGGCGTGTT CGCCTTCGGT AATGCCGAGT ACATGGGATC GGGTCCGGCG 
TTTGGCGACA CGGGCCCGTT CACAGCCGGG GGTTCGATCA GCGCATAG 

 

Protein sequence

MPRSPWKRRW GVASGGVVAA SALLALAGVS SSALVAQTSP MGNLFPQLAN VKVGSATASN 
NDTNPYGVAV VPKTMGNLVA GDVLVADFNS SAGTFGAGTS IVEVNPTTGQ STTFYQNADI 
TGPVGIAINP SNDIVWVGYW GSTANGSGSG YAVINSSGTL IANYTSTNST FAGVWGAAVA 
PGAFFWSNVA VSNTGADGQV WRLNPNPTGT SNGQPLNATY TALATGLPTN SNVSGGETAS 
NAGGPQGMVY DPANGMLYVA DDVNNTIYAI PNALTATTPQ TPMVVSQSPL LQSPQNIAIN 
PQNGDLLVVN GATNNDLLEI NPMNGMVVAT RVLDTGAAGG LFGLATATNA MGQLQVYYDD 
SNSSTLNALM APNTAYGSYA FVRGNGHVSS FGPLGTGQPA APASGVVGYA PDPAMAGAGW 
EVTASGMVMS VGGAPSYGSV QTAGVTHLAA PIVGIASTPD GMGYWLVGAD GGVFAFGDAH 
YMGNTYTDGL TGLGGAHPLA APIVGIASTP DGMGYWLVGA DGGVFAFGDA EYMGNTYTDG 
LTGLGGAHPL AAPIVGIAST PDGMGYWLVG ADGGVFAFGD AHYMGNTYTD GLTGLHGAHP 
LAQPVIGLVP TPDGMGYWLL AADGGVFAFG NAEYMGSGPA FGDTGPFTAG GSISA