| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1904 |
|---|
| Symbol | |
|---|
| ID | 8324000 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | - |
|---|
| Start bp | 1992408 |
|---|
| End bp | 1994294 |
|---|
| Gene Length | 1887 bp |
|---|
| Protein Length | 628 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644953028 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003110482 |
|---|
| Protein GI | 256372658 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.812108 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGCCT ACGACACCGT GTCTGCGTCG TCGACGGCGG CACGGATCGG GACACGGCAA
GCGCGCGAGC GCGGCTCAAC GTGGGCACAG CTCGCCTTCG CTGCGGCGTG CGTCGTGATC
TATGGTGCCG AGGCGCTCCT GCTCAGCTGG CCCGGTGGCG CTCACCTGAC GTCGAGGGTG
ATCGGCGATG GTGGTGACTC GCCGCAGTTT CTGTGGTACA TCCACTGGGT CGCGGGCTGG
CTGGTCGGTG CCCACGGGCT CTTCCTCACG CACCAGGTGC TCTATCCGAG GGGTGCGGAC
CTCGCGTGGG CCACCCTCGC GCTGCCTGCC GCCATCGTCG CGGGCGTGCT CGAGCACCTC
GGTGCGACGC CGGTCCTCGC CTACAACCTC GCGCTCCTCG GGTCCCTCGT CGCCGACGGT
GGTGCTGCGG CGTGGTGCGC GCGTCGCGTC GGGCTCGGCC GCGGCGCGGC CCTCGTCGCC
GGTGCGATCT ACCTCGCGAG CCCGTTCTTC ATGGGCCAGA TGCTCGGGCA TCTCAACCTG
GTCGACGGGG CAGGGCTCGC GTTGGTGGTG GGTTGGGCCT TCGACCTCTT CGATCGTGCC
GATCCCGCTC TCTGGCGCTT CGGTGTGCTC GGCGCGCTCC TGGCGCTCGT GGTCTGGAGC
GTCTACGACT ACGGCATCTA CGCGATCGCT GCCATCGTGG TGCTCTGGTT CGTGCATCCG
CAGCTCGCGT CGAGGCGTCT CGCGACCCTC GTGGCGTGGT GGCGGGGCTG GCTCGTCCTC
GGTGTTGTCG CCGTCGTCGC CGTCGCGCCG CTCCTCGACG CACTCCTGCT GAGTCCGCTC
GCGGTTCACG GTGGGGCGCA GACGCCCTTC TCGACCCCGT GGGTGGTCGA CGCGCTGTCC
TTCTTTGTGC CTGATCCGTG GGGCGCCTTC CACTTCCTCG CCCCCGTGTG GCACCTTGCC
CCGAACCTCG CGGACGGCTC GGGCTTCCCT GGCGCTGGTC CCTGGATCGG CCTCGTCGGT
GGCGTCGCGA TCGTCGTACG CCAGCGCCGT CACGGTCCGC TCGCGCCTCG GCTCGAGCGG
TTGATCCTGC CACTCGGGCT CGCCATGCTG ATCTTCGCTC TGGCGTCCAT GGGCCCTTAC
CTCCACGTCG ATGGGGTGCT GACGCCGATC CCGCTTCCGT ACCTGCCCTT CGATGCGATC
CCGTTCGTGT CCGACACCCT GCCGGAGCGT CTCGCGGTGC TCACGGCGCT GTTCGGGGCA
CTGCTCGGCG CAGCGGTGCT CGAGTGGGTC TGGGTTGCGC TCGGGCGCCG TCGCCACCGC
CGGCTGTTGC GTGCGGGGCT CGTCGCGGCC GTTGCGGTGG CGCTCTGGGT CGGTTCGGCG
CCGACGCCGT TCCCCGACAC TGCGCTCCCG CTGGTCCCTC GTCCCCGCGG GATCGCAGCG
GTCGGTGGCA CCACGTTCTA CGTGCCGGTG GTCATCCCGA CCCAGAGTGC CTGGGCAGCT
GGGATCGCGC TCTATCCCTA CGAGGCCGCC GTGATCGGGA CCCCGACGCC CGAGGGCTAT
GTGTCACGCC TGCCCGCGCA GACGATCGCT CGGTTGAACG ACTCCGCCGT CCTCGGCTAT
CTCTGGAGCG TGGCCCAACC GACCCAACCC GACGCGTCGC TGGCATCGCG GGCGGCCCAC
GAGCTGCCGG GGTACCTTGC CCGCCACGAC GTGTGCTCCA TCGTGGTCGA TCGCAGCCTG
CTTGCCCAGC CGCAGGCCGC GGTCGGGTGG TTGGAGGCGC ACCTCGGTGC GATCTGGCAC
GTGTTCGCGG TCAATGCGAC CTGGTTGGTC CTCGTGCACG CGCCCGGCGA TGGCTGCCGC
TCGGCGACAT CGAGGGCGGT CTCGTGA
|
|---|
| Protein sequence | MSAYDTVSAS STAARIGTRQ ARERGSTWAQ LAFAAACVVI YGAEALLLSW PGGAHLTSRV
IGDGGDSPQF LWYIHWVAGW LVGAHGLFLT HQVLYPRGAD LAWATLALPA AIVAGVLEHL
GATPVLAYNL ALLGSLVADG GAAAWCARRV GLGRGAALVA GAIYLASPFF MGQMLGHLNL
VDGAGLALVV GWAFDLFDRA DPALWRFGVL GALLALVVWS VYDYGIYAIA AIVVLWFVHP
QLASRRLATL VAWWRGWLVL GVVAVVAVAP LLDALLLSPL AVHGGAQTPF STPWVVDALS
FFVPDPWGAF HFLAPVWHLA PNLADGSGFP GAGPWIGLVG GVAIVVRQRR HGPLAPRLER
LILPLGLAML IFALASMGPY LHVDGVLTPI PLPYLPFDAI PFVSDTLPER LAVLTALFGA
LLGAAVLEWV WVALGRRRHR RLLRAGLVAA VAVALWVGSA PTPFPDTALP LVPRPRGIAA
VGGTTFYVPV VIPTQSAWAA GIALYPYEAA VIGTPTPEGY VSRLPAQTIA RLNDSAVLGY
LWSVAQPTQP DASLASRAAH ELPGYLARHD VCSIVVDRSL LAQPQAAVGW LEAHLGAIWH
VFAVNATWLV LVHAPGDGCR SATSRAVS
|
|---|
| |