Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_1772 |
Symbol | |
ID | 8323865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | - |
Start bp | 1858058 |
End bp | 1858744 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644952902 |
Product | peptidase C60 sortase A and B |
Protein accession | YP_003110359 |
Protein GI | 256372535 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3764] Sortase (surface protein transpeptidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGTCG CTGAGCGCGC CCGGAGCGCT CGTTGGCGCC GGCTCGCGGT GGGCGGGTCC GCCCTCGCGA TCGTTGCGGG GGGCTGGCTC GTCTACGACG GTATCGCGAC GTCGCCGGCT GCTCGCATCG CGCGTCTGAC CCACCTCGAT CACGTGCGAG CCCGGTCACT CGCGAGCCAG AGAGCGATCG CTCCCCGCCA AGGCGGGAGT CGTCTCGTGC CGTTTACGCC GACCGTGTCG GGCGAGGTCG CCGAGATCTC CATCCCTGCG CTTGCCGTGA GCGCGCCGGT GGTCGCCGAG GGGCCGGTGA ACGGTGAGCT GACCATCCCG TCCGACGTGC ACACGGTGGG GTGGGACGAG CAGACGCCAT CGCCCGGAGC GCCCGGAGTG ACGCTGCTCG CTGGGCACGT GAACTGGGTC GGGCAGGGCG AGGGCGCCCT CGGCGAGATC GGCCAGCTCG TCCCCGGTGA TCTTGTCTAT CTCAACTGGG GTGGGCGCGA GACCGAGTGG CGAGTCGACA CGAAGCCGGT GCTCTCGCCG AACACCGTCG TGCATCCACA GCTCTTCACG ACCCAAGGGC CACCCACACT CGCGCTGGTG ACCTGTGGGG GACCGTTCAC TGAGGTCCCT GGCGTCGGCG GGTCCTATGC CGACAATGTG ATCGTCGAGG CTTCGCTCGT CGGCTGA
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Protein sequence | MSVAERARSA RWRRLAVGGS ALAIVAGGWL VYDGIATSPA ARIARLTHLD HVRARSLASQ RAIAPRQGGS RLVPFTPTVS GEVAEISIPA LAVSAPVVAE GPVNGELTIP SDVHTVGWDE QTPSPGAPGV TLLAGHVNWV GQGEGALGEI GQLVPGDLVY LNWGGRETEW RVDTKPVLSP NTVVHPQLFT TQGPPTLALV TCGGPFTEVP GVGGSYADNV IVEASLVG
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