Gene Afer_1770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1770 
Symbol 
ID8323863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp1855712 
End bp1857250 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content70% 
IMG OID644952900 
Productacyl-CoA dehydrogenase domain protein 
Protein accessionYP_003110357 
Protein GI256372533 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGTGG CCCCTGAGCA GCTCGACGAC GTCGAGCGCA TCGCCCGAGC CGCCCTCGCC 
CGACTCGGCA CCGAGGGCAT CGACGACGAC CAAGAGCTCG CGTGGCGCCT CGCGCACGTC
GTGAGCGCTC TCGGCGCCGT GCGAGCACTC GTGGACGATC CGGCGGTACC CCAAGCGCTC
GCGAGCTACG GTGCAGCCCT GTTCCTGCGG GAAGCGGCGA GCGAGCTCGT CGCGCTCGGC
GTCATCGACG ACCTCGGTGC GCTTCCGCTC CCACCGCGAC CGTCCGAGGC GGCCGCTGCC
GAGGTCGCCG AGGCGCCCAC GACGTGGTCG CTGGGGGCCG ACCTCGATCT CGCACGCGAC
ACCTTCGGGC GCTTCGCGCG CGACGAGATC GCACCGGTCG CCGACGAGGT CCATCGGCGC
AACCTCGACG TACCCGAGCG CATCATCGAG GGCCTGGCTG GGCTCGGCGC TTTCGGCCTC
AGCATCCCCG AACGCTACGG AGGCTCCGCC ACCGGAAGCG TCGACGACAC GCTGGCCATG
CTGGTTGCGA CCGAAGCACT CTCGCAGGCC TCGCTCGGGA TCGGCGGCTC GCTGATCACG
CGCCCCGAGA TCATCGCCCG GGCGATCCTT GCCGGTGGCA CCGAGGAGCA ACGGGTCCGC
TACCTGCCAG CGCTCGCGTC GGGCGAGCTC ATGGGCGCTG TCGCCGTAAC GGAGCCCGAC
TACGGCTCCG ATGTCGCCTC GATCACGACG CAGGCGATCC TCGGGCCCGA CACGGCCACC
GTGCGCGGCA CGAAGACCTG GTGCACGTTC GCTGGACGCG CCAACCTGCT CGCGGTCCTC
GCCCGCACCG AGCCCGACCC GAGCCTGCGT CATCGAGGGC TGTCACTCCT CCTCGTCCCC
AAGGATCCCG TCCCGGGCCA CAGCTTCGAC CTCGAGATCG GCGGGGGCCG GCTCACGGGC
CGCGCGATCG ACACGCTCGG CTATCGCGGG ATGCACTCCT ACGAGGTCGC CTTCGACGAC
GTCAGCGTTG CGCGCGAGCA GATCGTCGGC GGCGAGGAGG GACGTGGCCG AGGGTTCTAC
CTCCAGATGG CTGGCTTCGA GAACGGGCGA CTCCAGACGG TGGCGCGAGC AGTCGGACTG
ATGGACGCCG CACTTGCGCA GGCGCGCGCC TACGTCGCCA ACCGGCGCGT GTTCGGACGC
AGTCTCGCCG ACTACACCCT GACCCGGCGC AAGCTCGCTC GCATGGTCGC GACGGTGGCG
GCGGCACGGG CCGCCGCCTA CCGCACCGCA CGTCACCTCG AGACCCCCGA AGGGTCGCTC
GCAGCCTCGA TGGCCAAGGC ATGGTCGTGT CGCCAGGCAG AGTTGGTCAC GCGCGAAGCA
CAGCAGCTTC ATGGTGGCAT GGGCTATGCC GAGGAGTACC CGGTGAGCCG TTACTTCGTC
GATGCCCGGG TGCTCTCGAT CTTCGAAGGC GCCGACGAGA CGCTGTCGCT GCGCGTCATC
GCGCGAGCAG TCGCATCGTC CAGCGAGACG ACACGATGA
 
Protein sequence
MHVAPEQLDD VERIARAALA RLGTEGIDDD QELAWRLAHV VSALGAVRAL VDDPAVPQAL 
ASYGAALFLR EAASELVALG VIDDLGALPL PPRPSEAAAA EVAEAPTTWS LGADLDLARD
TFGRFARDEI APVADEVHRR NLDVPERIIE GLAGLGAFGL SIPERYGGSA TGSVDDTLAM
LVATEALSQA SLGIGGSLIT RPEIIARAIL AGGTEEQRVR YLPALASGEL MGAVAVTEPD
YGSDVASITT QAILGPDTAT VRGTKTWCTF AGRANLLAVL ARTEPDPSLR HRGLSLLLVP
KDPVPGHSFD LEIGGGRLTG RAIDTLGYRG MHSYEVAFDD VSVAREQIVG GEEGRGRGFY
LQMAGFENGR LQTVARAVGL MDAALAQARA YVANRRVFGR SLADYTLTRR KLARMVATVA
AARAAAYRTA RHLETPEGSL AASMAKAWSC RQAELVTREA QQLHGGMGYA EEYPVSRYFV
DARVLSIFEG ADETLSLRVI ARAVASSSET TR