| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1763 |
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| Symbol | |
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| ID | 8323856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1848101 |
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| End bp | 1850719 |
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| Gene Length | 2619 bp |
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| Protein Length | 872 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644952893 |
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| Product | preprotein translocase, SecA subunit |
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| Protein accession | YP_003110350 |
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| Protein GI | 256372526 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.639667 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGATCT TCGATCGCAT CCTACGAGCG GGCGAGGGCA AGCGCCTCAA GCGTCTGCAG
GCAGTCGTCC CGCTCATCAA CCAGCTAGAA CCCGAGATCG CCCAACTCGA CGACGCGGCA
CTGCGTGCGA AGACCGCCGA GTTCCGTCAG CGGCTCGAGG AGGGCGAGAC TCTCGAGGAC
CTGTTGGTCG AGGCCTTCGC GGTGGTGCGC GAGGCCGCTC GGCGAGCGAT CGGTCAGCGG
CACTACGACG TGCAGCTGCT CGGCGGGATG GCGCTCCACT TCGGGTGGAT CGCCGAGATG
CAGACCGGAG AAGGCAAGAC CTTGGTGTCG ACCCTCCCGG CCTACCTGAA CGCGCTCGAG
GGCAAGGGCG TGCACATCGT GACGGTCAAC GACTACCTGG CCGCACGCGA CGCCGCCTGG
ATGGGACGCA TCTACGCCGC CCTCGGGATG ACGGTCGGTC GGGTCGGGGC CGACGAGAGC
GATCCCGCCG CCAAGCGCGC GGCGTACCTC GCCGACATCA CCTACGGCAC CAACACCGAG
TTCGGGTTCG ACTACCTGCG CGACAACATG GCGACGTCGT TGGAGGAGGT GGTGCAGCGT
CCGCACCACT ACGCCATCGT CGACGAGGTC GACTCCATCT TGATCGACGA GGCACGCACG
CCGCTCATCA TCTCGGGGCC GTCGGAGATG AGCCCCGATC TCTACTACCG CTTCGCCTCG
ATCGTGCGCA CCCTCCGTCC GGACGTCGAC TATGAGATCG ACGAGGAGAA GAAGGTCGTC
CTCCCGACGG AGGCCGGCAT CGAACGGGTG GAGCGCGCGC TCGGGGTCGA GAACCTCTAC
GACATCGCGC ACATGGGCTA CTTGCACCAG CTCACCCAGG CGCTGCGGGC AAAGCACCTG
TACCTGCGCG ATCGCGACTA CATCGTCGAC CGGGGCGAGG TCAAGATCGT CGACGAGTTC
ACGGGGCGCA TCCTGGAGGG CCGGCGTTGG TCGGACGGGT TGCACCAGGC CGTGGAGGCC
AAGGAGCGGG TGCGGATCCA GGAGGAGAAC CACACCTGGG CCACCGTGAC CCTCCAGAAC
TACTTCCGCC TCTACGACAA GCTTGCGGGG ATGACCGGTA CGGCCCAGAC GGAAGCCGCG
GAGTTCGCCT CGACGTACGG CCTCCAGGTC GTGCCGATCC CGACGAATCG ACCCGTGCAA
CGTGTCGATC GCGCAGACCT CGTGTTCAAG TCGGAGCTCG GGAAGTTCGG CGCCGTTGTC
GAGGAGATCG CCGAGCGATC GGCGAAGGGC CAGCCGGTGC TCGTCGGCAC GGTCTCGGTT
GCCAAGTCCG AGTTGCTCTC GAGTCTGCTC GCAGAACGCG GGATCTCGCA TGCGGTGCTG
AACGCGAAGT ACCACGCTGC CGAGGCGGAG ATCATCGCCC AGGCCGGACG CCTCGGCGCC
GTCACCGTCG CCACGAACAT GGCTGGGCGC GGTGTCGACA TCTTGCTCGG CGGCAACCCC
GAGGGGCTCG CGGCGATCGC GGTGCGCGAA GCCGGACTCG ACCCCACGAC CGATGAGGGA
CGTGCTGCCT ACGAGGAAGC TCTCGGCAAG TTCCAACAGG TGTGCGCCGA CGAAGGTGAG
CAGGTGCGCT CGCTCGGAGG TCTCTACGTC ATCGGCTCGG AGCGCCATGA GTCTCGTCGG
ATCGACAACC AGCTGCGAGG TCGATCGGGT CGCCAAGGTG ACCCCGGCGA GACGCGGTTC
TTCCTCTCGC TCGAGGACGA ACTCATGCGT ATCTTTGCGG GTGGCAGCGT CGTGTCGTGG
GTGATGAATC GTGCGTTCCC GGAGGATCAA CCGATCGAGG CCAAGGCCGT GTCGCGAGCG
ATCGAGCGTG CCCAGGCGAC GGTCGAAGCG CGCAACGCCG ACATCCGCAA GGACGTGCTC
AAGTACGACC AGGTGCTCGA CGAGCAGCGC AAGGTCATCT ACGCCAGGCG CCGAGAGATC
CTCGAAGGGG AGGATCTGTC GGAGTTCGCT CGCCAGAGCA TCGAGCGCAC GGTTCGGCGT
GTCGCGGACG TCTACGCTCC TGGGGCCTAC GGCGAGGACT GGGACCTTGC GGGCCTGGTC
GACGAGGCGC GGCGAACCTG GGGGAGCGCC TTCACCGCCG AGGAGCTCGC CGACGCGCAG
AGCCGCGATC AACTTGTGAG CTCGCTGGTC GTCGAGGCCT TGGAGCTCTA CGACGAGCGC
GAACGCGCGC TCGGTGCCGA TGCCGATGGC ACCCCCAGGC TCCGAGCGCT CGAGCGCGAC
GTGCTCTTGG GCGTCATCGA TCAGCACTGG CGCGACCATC TCATCGACAT GGACTATCTG
CGCGAGGGCA TCAACTTGCG TGCCATGGGT CAGCAGGACC CGCTCGTCGC GTGGCAGCAA
GAGGGCTTCG AGATGTTCCA GGAGCTAATG CGCCGCATCG AGGACGACTT CGTGCGGTAC
CTGTTCCGAA CCGAATCCTC GCAGAACGTG CCGAAGCTCG ACCTGTCGGG CGCGCGCTAC
TTCGGCGCCA CCGATCCGCA GGCGATGAGC ATCTTGGACC TCATCCGCGA GGCTCGCGAC
GTCACCGAGG GTCCTGAGTC CGAGGGCGGT TCGGCGTGA
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| Protein sequence | MGIFDRILRA GEGKRLKRLQ AVVPLINQLE PEIAQLDDAA LRAKTAEFRQ RLEEGETLED
LLVEAFAVVR EAARRAIGQR HYDVQLLGGM ALHFGWIAEM QTGEGKTLVS TLPAYLNALE
GKGVHIVTVN DYLAARDAAW MGRIYAALGM TVGRVGADES DPAAKRAAYL ADITYGTNTE
FGFDYLRDNM ATSLEEVVQR PHHYAIVDEV DSILIDEART PLIISGPSEM SPDLYYRFAS
IVRTLRPDVD YEIDEEKKVV LPTEAGIERV ERALGVENLY DIAHMGYLHQ LTQALRAKHL
YLRDRDYIVD RGEVKIVDEF TGRILEGRRW SDGLHQAVEA KERVRIQEEN HTWATVTLQN
YFRLYDKLAG MTGTAQTEAA EFASTYGLQV VPIPTNRPVQ RVDRADLVFK SELGKFGAVV
EEIAERSAKG QPVLVGTVSV AKSELLSSLL AERGISHAVL NAKYHAAEAE IIAQAGRLGA
VTVATNMAGR GVDILLGGNP EGLAAIAVRE AGLDPTTDEG RAAYEEALGK FQQVCADEGE
QVRSLGGLYV IGSERHESRR IDNQLRGRSG RQGDPGETRF FLSLEDELMR IFAGGSVVSW
VMNRAFPEDQ PIEAKAVSRA IERAQATVEA RNADIRKDVL KYDQVLDEQR KVIYARRREI
LEGEDLSEFA RQSIERTVRR VADVYAPGAY GEDWDLAGLV DEARRTWGSA FTAEELADAQ
SRDQLVSSLV VEALELYDER ERALGADADG TPRLRALERD VLLGVIDQHW RDHLIDMDYL
REGINLRAMG QQDPLVAWQQ EGFEMFQELM RRIEDDFVRY LFRTESSQNV PKLDLSGARY
FGATDPQAMS ILDLIREARD VTEGPESEGG SA
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