Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_1737 |
Symbol | |
ID | 8323828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 1822698 |
End bp | 1824062 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644952868 |
Product | ABC-1 domain protein |
Protein accession | YP_003110326 |
Protein GI | 256372502 |
COG category | [R] General function prediction only |
COG ID | [COG0661] Predicted unusual protein kinase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.169861 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCACTA GACTGTCGAT CACGAGCAGA CAACGCCTGT GGCAGGTGGG TCGAGCGGCC ACGACCATCG CGGCCCGCGA CACCCTTCGT CGTATCGGTA TCGCGCTCAC GCCAGGTCCC AGCAAGGACG CGGCCCAGCG AGCACGGACA CTGCGCACGA CGACCGACGT AGCGGCCGCC GTCGCGGGCA TGCGCGGCCT CACCGTCAAG CTTGCGCAGA TGGCGTCCTA CGTCGATCCC GCCGCCCCCG ACGACGTCCG CAACGGTCTC GCGCGCTTCC AAGACGCCGC ACCGCCGATG AGCGCCGACC TCGCGCTCGG CGTCCTGCGC GACGAACTCG GCGAACGGCT CTCGCGGTTC GCCGAGATCG AAGAGGAGCC CCGGGCCGCG GCCTCGATCG GTCAGGTCCA TCGCGCCACG CTCCGCGATG GCACCACCGT GGCGCTGAAG ATCCAGTACC CGGACGCGCG CGAACTCATC ACCGCCGACC TCGAGCAAGC GCCAGCCATC GTCGGCCTTC TGCGCTTCGC CTTTCCCTCG ATGCGCGTCG ACGACATCGT CGCCGAACTC GCCACGCGGG TCCGCGACGA ACTCGATTAC CGGCGCGAGG CTGCCGTCCA GGCTCGCTTC GCACGGGCCT ACGCCGGCCA CCCGCGCATC GTCATCCCCC GCCCGATCGG AGCGCTCACG ACGAGCAGGG TCCTCGTCAC CGAATGGATC GATGGCGCAC CCTTTGCGAG TGCTGCCACC CTCGAGCCCG AGGAGCGGTC CGAGATCGGC GAGATCCTGT TCCGCTTCGT CTTCGCGAGT CTCTATCGCC TCCGTCTCTA CAACGGCGAC CCGCATCCCG GCAACTACCT CATCCTCGAC GGACCACGCC CGCGCGTTGC CTTCCTCGAC TTCGGATTCT CGCGCTCGTT CACCGCCGAC GAGATGGCAA CCTTCGAGGC GCTGATCAGG GCGCGTGTCG TGACGCCCGA CCGCCACGCC TTCGCCGAGA CGCTTCGAGC AGCCGGCCTC GTCATCGGCG ACGACCACGA CGACGACGTG CTGTGGGAGT TCTTCGCTCC CTACTACGAA CTCGTCGAGA CACCTGGACC GCGCACGGTG ACGCCGGCGT GGGCCTCGGG CATCCTTCGT CACACCTTCG ACCGATCGCA CCCGCTGGCC AGCGCCGTCA ACGTGCCACC GGCGTTCGTC GTGGTCCAAC GGATCAACCT CGGCCTCTAT GCACTCCTCG CCGAGCTCGG TGCGACGGCC GACTGGCGTG CCATCGCCGA GGACATCTGG CCATTCGTCG CTCGCGCCCC GATCACACCG ATCGGCCAGG AGGAGGCCGC CTGGCGTCTG GAGAGGGCTC GATGA
|
Protein sequence | MATRLSITSR QRLWQVGRAA TTIAARDTLR RIGIALTPGP SKDAAQRART LRTTTDVAAA VAGMRGLTVK LAQMASYVDP AAPDDVRNGL ARFQDAAPPM SADLALGVLR DELGERLSRF AEIEEEPRAA ASIGQVHRAT LRDGTTVALK IQYPDARELI TADLEQAPAI VGLLRFAFPS MRVDDIVAEL ATRVRDELDY RREAAVQARF ARAYAGHPRI VIPRPIGALT TSRVLVTEWI DGAPFASAAT LEPEERSEIG EILFRFVFAS LYRLRLYNGD PHPGNYLILD GPRPRVAFLD FGFSRSFTAD EMATFEALIR ARVVTPDRHA FAETLRAAGL VIGDDHDDDV LWEFFAPYYE LVETPGPRTV TPAWASGILR HTFDRSHPLA SAVNVPPAFV VVQRINLGLY ALLAELGATA DWRAIAEDIW PFVARAPITP IGQEEAAWRL ERAR
|
| |