| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1733 |
|---|
| Symbol | |
|---|
| ID | 8323824 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | - |
|---|
| Start bp | 1818936 |
|---|
| End bp | 1819691 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644952864 |
|---|
| Product | alpha/beta hydrolase fold protein |
|---|
| Protein accession | YP_003110322 |
|---|
| Protein GI | 256372498 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2267] Lysophospholipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGTCGAG ACTTGGCGGT CGATCGCTTC GCGGGCTCGG AGCCGCGCGT CGTCGTGGTG
CACGGCGTGC TCGATCGTGC TGCGACCTTT CGACGCTTCG CGCGAGCGCT CGCACCGCTC
GAGGTCGTGC TCTACGACCG CCGTGGTTAC GCGCGCTCTC GGGACATGGG GCCCGCCACC
TTCACGGCGC ACCTCGCAGA CCTGCGGGCT GTGGTGGGGC GCGAGCATGC GACGGTGGTC
GTTGGTCATT CGCTCGGAGG GACGCTCGCA CTCGCCTTGG CGAGCGATCC TCCGCCCACG
CTGCGTGGCG TGAGTGTCTT CGAGGCGCCC CTGCCGACGT CGGCGTGGTG GGGACCGTGG
GCAGTGGACC CTCGGTCGGT GCTGGCGGGT GAGGTTCCCG AACCAGACCT CGAGGAGCTG
GTGAGCGACT TCCTGCGTCG AGCGATGGGC CCTGCGCTCG CACAGCTCGG GCCGAACTTC
CTTGCGGAGC GCCGAGCAGA GGCCCCAGCC TTCACGCGAG AACTCGCCGA GCTCGCTGCT
GGTGAGGTTG CCATCGACCT CGACCGGATC TCGGTCCCGG TGCAAGCGGG CATCGGCGAG
CTGGCAGGGA CTCGCCATCG CCGAGGACTT GCAACACTCA TGGCGAGCAT CGATGCCGAG
GCCTACTGTG TGAGGGGCGC TCCCCACGGG GTGCACCTGT CGGCGCCAGC GGCCTGGGCC
GAGGCGGTCC GCGACTTCAT TCGTCGCCTC GACTGA
|
|---|
| Protein sequence | MGRDLAVDRF AGSEPRVVVV HGVLDRAATF RRFARALAPL EVVLYDRRGY ARSRDMGPAT
FTAHLADLRA VVGREHATVV VGHSLGGTLA LALASDPPPT LRGVSVFEAP LPTSAWWGPW
AVDPRSVLAG EVPEPDLEEL VSDFLRRAMG PALAQLGPNF LAERRAEAPA FTRELAELAA
GEVAIDLDRI SVPVQAGIGE LAGTRHRRGL ATLMASIDAE AYCVRGAPHG VHLSAPAAWA
EAVRDFIRRL D
|
|---|
| |