| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1717 |
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| Symbol | |
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| ID | 8323808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1802119 |
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| End bp | 1803183 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644952848 |
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| Product | 3-dehydroquinate synthase |
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| Protein accession | YP_003110306 |
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| Protein GI | 256372482 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0337] 3-dehydroquinate synthetase |
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| TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGCAAG GTCCTCCGAG CGCACTCCGA TCAGCGTGGG CAGCGCGAGG CCGTGCGACC
CGCCGGTTCT CGATGCGAAC GCCACAGCAC GAGGTGGCCA TCACGGTCGG GAGCGGCATC
CTCCAGGACT CTCGCGAGAT CGTCCCGGAG GACTGGCGCC AGGCCTTCGT GGTGACCCAA
GCCGCGATTC CCCTCCCTGC GTCATGGCCC TGGCCTGTCA TTGAGGTTCC CAATGGCGAG
CGCGCCAAGC GGCTCGCGGT GGTGGAGCGG GTGGCTGAGG AGCTCGCCAG CGCCGGGGCC
ACTCGGGGAG ATGGCCTCAT CGCCATCGGT GGAGGGGTGG TCACCGACCT GGCGGGTTTC
GTTGCCGCCA CCTACCACCG TGGCATCGAC TTCGTCGCGG TGCCGACCTC ACTCCTTGGT
ATGGTCGACG CGGCCATCGG CGGCAAGACC GCGGTCAACC TGCGTGCCGG TAAAAATCTC
GTCGGCGCCT TCTGGCAGCC GCGACGAGTC GTCGCCGACC TCGATGTGCT GGCGACACTG
CCTCGTCGCC AGTGGCGAAG TGGTCTTGGC GAGCTGGCGA AGTACGCCTT CCTTGGCCTC
GATCGTCTGG TCGAGCTCCC GCTCGACGAG GCGGTTGCCG AGGCGGCCCA GGCAAAGGCG
CGCGTCGTGG AGCGCGATGA GCGCGAGCAC GGTGAGCGCG CACTGCTGAA CTACGGGCAT
ACGGTGGGCC ATGCCATCGA GGCAGCCGCC TTGGCGCGTC GCCGGCCCTT GAGCCATGGC
GAGGCGGTGG CGATCGGCCT CGTGGTCGAG GCGATCGTTG CCGAGCGTCT CGGCAGGATC
ACGCGAGATC GCGTGATCCA GCACGTCGAG GTGGTGGCGC GTCTCGGCCT CGCACATCGC
GTGCCGCCGT GGATCGGGGC CGCAGAGGTG ATGGTCTTTC TCGCAGCGGA CAAGAAGCAC
CGAGGGTCAC TCGCGATGGT CCTCGATGGA CCGAGCGGTC TCGAGCTGGT CCACGGCGTG
CCAGAGGCGG TGATCGTCGC GGCAATCGAC GAGGCACGCG CATGA
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| Protein sequence | MVQGPPSALR SAWAARGRAT RRFSMRTPQH EVAITVGSGI LQDSREIVPE DWRQAFVVTQ
AAIPLPASWP WPVIEVPNGE RAKRLAVVER VAEELASAGA TRGDGLIAIG GGVVTDLAGF
VAATYHRGID FVAVPTSLLG MVDAAIGGKT AVNLRAGKNL VGAFWQPRRV VADLDVLATL
PRRQWRSGLG ELAKYAFLGL DRLVELPLDE AVAEAAQAKA RVVERDEREH GERALLNYGH
TVGHAIEAAA LARRRPLSHG EAVAIGLVVE AIVAERLGRI TRDRVIQHVE VVARLGLAHR
VPPWIGAAEV MVFLAADKKH RGSLAMVLDG PSGLELVHGV PEAVIVAAID EARA
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