Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_1584 |
Symbol | |
ID | 8323675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | - |
Start bp | 1668068 |
End bp | 1668790 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644952721 |
Product | glycerophosphoryl diester phosphodiesterase |
Protein accession | YP_003110179 |
Protein GI | 256372355 |
COG category | [C] Energy production and conversion |
COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.879404 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCGTAG CGCAGCACGC AGCCGCGGTC GCGCTGTGGT CGCACCGTGG CCGTCTCGAC GGCTCGGCGC TCACGGAGAA CACGGTGGGC GCTGTCGAGG CAGCGCTCAG GGGAGGTGCG GACGGCATCG AGATCGACGT CTGGCCGACG ACGGACGGTG CCTTCGTCCT CCATCACGAT CCTGACGTCG ACGGCGTCAC GATCCAGCGC GCCCCCAGCA CGTCGCTTCG TCGACTCCCG ACCCTCGAGG ACGTGCTCGA GGTCGTGGGG TCGTCGATGC TCGACATCGA GTTGAAGCTG CTGCCAGAGA CGGGCGTGCG TGCGGCCGTC GAGGCCTCGG TGCGGCTGGT GGAGTTGGTT CGCGAACGCG ACGCCCTGAT CTCGTCGTTC GACGAGCGCG CGGTGCGAGC GTGTCTCGCC TCTGGGGCGC GGGCGGGACT CATCGTCGAG GAGGCACCGG CGGAGTCGAC GCTGCGCGAT CTCGAGGAGC TCGGTCTCCG GTGGCTCCTC GTCGGGGTCG ACCTGCTGCG TGAGGGTTGG CGGCCGCCCG CCGTGGCGAG CTGGGACGTC GGCGTCTGGA CGGTGAACGA CGAGGAGGCG TTCTCGCGTG CCCTGTCGGT CCACCCGACG GCAATCATCA CCGACGTGCC CATCGCGGCG CGCGGGTGGC TCGGCGCTGT GGGGCACCCG AGCGGGACCT CGAGCCCACG CCGCAGCCCA TGA
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Protein sequence | MGVAQHAAAV ALWSHRGRLD GSALTENTVG AVEAALRGGA DGIEIDVWPT TDGAFVLHHD PDVDGVTIQR APSTSLRRLP TLEDVLEVVG SSMLDIELKL LPETGVRAAV EASVRLVELV RERDALISSF DERAVRACLA SGARAGLIVE EAPAESTLRD LEELGLRWLL VGVDLLREGW RPPAVASWDV GVWTVNDEEA FSRALSVHPT AIITDVPIAA RGWLGAVGHP SGTSSPRRSP
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