Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_1529 |
Symbol | |
ID | 8323615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | - |
Start bp | 1600431 |
End bp | 1601981 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644952662 |
Product | 2-isopropylmalate synthase |
Protein accession | YP_003110125 |
Protein GI | 256372301 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGACGAGG TAGGAACGCA AGAGCGGATT CGGATCTTCG ATACGACCCT GCGCGACGGT GAGCAGGCGC CCGGCATCTC GCTCGATCCT TTGGAGAAGC TCGAGATCGC TGAGCAGCTT GCTCGACTCG GCGTGGACAT CATCGAGGCG GGATTCCCGG TCGCGAGCCA GGGCGACTTC GACGCGGTCC GCCAGATCGC GCGCCAGGTG CACGGCCCTG TGATCTGCGG CCTGTCGAGG ACCCACGTGG CGGACATCGA GCGCTGCTAC GAAGCGGTCC GCGATGCGGA GCACCACCGC ATCCACGTCT TCATCTCGAC GTCGCCGAGT CACCTCGAGC ACATGTTGCG CATGAGCGAG GATCAGGTGG TCGAGGCCGT GCGTCGCGCG ATCGCTCGCG CACGTGAGCT CGTCGACGAC GTCGAGTTCT CTCCGCAGGA CGCAACGCGC ACGCCGCTGC CGTTCCTCTA CCGCGTGCTC CAGGTCGCCG TCGACGAGGG CGCGAGCACG CTCAACATCC CCGACACCGT TGGCTACGGC ATTCCCTGGG ATTTCGCGCG CATGGTCGAG TCGGTGCGCC GGGAGGTCGC CGGTTCCTAC GTGATCTCGT GTCACTGTCA CAACGACCTT GGTCTCGCGA CGGCCAACTC CCTGGCCGCC GTGGCCGCGG GTGCACGCCA GGTTGAGTGC TGCATCAACG GGATCGGGGA GCGTGCAGGG AACGCCGCAC TCGAAGAGGT CGTGATGGGG CTTGCGATCC GTTCGGATGT GATCGGCGAC GTCACAACCG GGATCGACAC GCGCGAGCTC GCGCGAACCT CTCGACTCGT CTCGCGGCTC ACCGGCTATC CGGTGCAGTA CAACAAGGCG GTCGTTGGCC GGAATGCCTT CGCGCACGAG TCGGGCATCC ATCAGCACGG TGTCCTCACC GATCGCTCCA CCTATGAGGT GATCGACGCT GCCAGCGTCG GCCAGGAGGC AGCCCAAATC GTGCTCGGGA AGCATTCTGG TCGGCACGCC TTCCAAGAAG CGTTGGCGCG CATGGGGATC GCGCTCGAGG GTGATGCGCT CAACGCGACC TTCCAGCGCT TCAAGGAGCT CGCTGACCGC AAGGTCGAGT TGTCGGAGGC CGATCTCGAG GCGATCGTTG CCGAAGAGCT CGGCACGACG CTCGCCGATC GGTTCGAGCT CGTGAGCTTT CGGGTCGAGG CGGGAACGGG TCGCGAGGCC GTGGCGTCGG CCACCGTGCT CGTCGATGGG ACCCCGGTCG AGGCCTCGGC CTCCGGCAAC GGCATGGTCG ACGCGCTCGG TCGGGTGCTC GCCGAGGCGA CGGCCCTCGA GGCACGGCTC ACCGGCTTCT CGGTGACGTC GGTGACGGGC GGGGCCGATG CGCTGGGATC GGTCGCGGTG ACCGTCGACG TCGGTGGGCA CGAGGTGAGT GGGCGTGGCG TGTCGACGGA CATCGTCGAG GCCTCTGCGC GTGCGCTCTT GAATGCGCTC AATCGAGCAG CGCGGGTGCG CGAGAAGGCA TCGAACCGCG AGACGCCCTG A
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Protein sequence | MDEVGTQERI RIFDTTLRDG EQAPGISLDP LEKLEIAEQL ARLGVDIIEA GFPVASQGDF DAVRQIARQV HGPVICGLSR THVADIERCY EAVRDAEHHR IHVFISTSPS HLEHMLRMSE DQVVEAVRRA IARARELVDD VEFSPQDATR TPLPFLYRVL QVAVDEGAST LNIPDTVGYG IPWDFARMVE SVRREVAGSY VISCHCHNDL GLATANSLAA VAAGARQVEC CINGIGERAG NAALEEVVMG LAIRSDVIGD VTTGIDTREL ARTSRLVSRL TGYPVQYNKA VVGRNAFAHE SGIHQHGVLT DRSTYEVIDA ASVGQEAAQI VLGKHSGRHA FQEALARMGI ALEGDALNAT FQRFKELADR KVELSEADLE AIVAEELGTT LADRFELVSF RVEAGTGREA VASATVLVDG TPVEASASGN GMVDALGRVL AEATALEARL TGFSVTSVTG GADALGSVAV TVDVGGHEVS GRGVSTDIVE ASARALLNAL NRAARVREKA SNRETP
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