Gene Afer_1521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1521 
Symbol 
ID8323605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp1587848 
End bp1589260 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content66% 
IMG OID644952652 
Productglucose-6-phosphate 1-dehydrogenase 
Protein accessionYP_003110117 
Protein GI256372293 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0364] Glucose-6-phosphate 1-dehydrogenase 
TIGRFAM ID[TIGR00871] glucose-6-phosphate 1-dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGGGGCG CAGCTGCGCC CCTAGGAGGA GGCTCGTTCG TGGATGTCTT CGTGATCTTT 
GGGGTGAGCG GTGATCTCGC TCGTAAGATG ACCTTCCCCT CGCTCTATCG TCTCGAGGAG
CGTGGGGCGC TCGACTTTCC GATCGTCGGC GTCGCGCTGG ACGACTGGAG CACGGGCGAT
CTCGAGACGA GGATGCGCGA GTCCGTCAGC TCGCAGATCG CGGACGCCAA GCCCTCGGTC
GTCGACCGGC TCGGGCGACG CTTGCGCTAC GTGCGTGGAG ACTTCACGAG TCGAGACACG
GTCGATGCGC TGCGTTCGGC CGTGGGACGG GTCCACCAGG CTCTCGTCTA CCTCGAGATC
CCCCCTGCTC TGTTCGCGCC GGTCATCGAG AATCTCCAGC GCGAGCCGAT CGCGAGCGAG
GTCACCTACC TGATCGAGAA GCCTTTCGGC CATGACCTCG CCTCAGCGCA GGCTCTCAAT
GAACGACTCC ACCGCGTGGT CGATGAGCAA TCCATCCTGC GGATCGACCA TTTTCTCGGC
AAGCAACCGC TCGCGGACCT CGTCCACCTT CGCTTTGCGA ACGAGGTCCT CGAGCCGTTG
TGGCGTCGAG AACACGTCGA GGAGATCCAG GTGACGATGG CAGAAGACTT CGGAGTCGAG
GACCGAGGCA GCTTCTACGA CCCAGTTGGA GCTCTTCGCG ATGTGGTCGT CAACCACCTG
TTGCAGCTCT TGGCGCTCGT GCTCATGGAG CCGCCGAGTC GGCCTGGTGC CGATGGACTG
TGGGACGCAC GCGTGGCGGT CCTGCGAGAG ATGGACCTCA TCGAGCCGAG TCGCGTCGTG
CGGGGTCAGT ACGAGGGTTA CCGGTCCATC CCGGGAGTCG GGGCCGACTC GACGACCGAG
ACCTTCATTG CGCTCGCGCT CGGCGTGCAT TCATGGCGGT GGGATGGCGT ACCGGTCGTG
GTCCGAGCGG GGAAGGCTTT GCCGGTGACC GCGACCGAGG TCCGCCTCGT CCTGCGGCGC
CCTCCACGTC TCGGGGCCTT GGGGCTGCCC GAGCACCTCG AGGCCAACGA GATCATCCTC
CGGATCGATC CTGATTCGGC GCTGCGTGTG ACCTTGCAGT CGCTCGACGC TGAGGAGCGC
CATCTCGCGC CGGTGCATCT CGACCTCTCG TTCCGGGCAG AACTCGGTCG GTCGCCAGAG
CCGTACGAAG TGCTCTTCCT CGCTGCCCTC GAAGGCGACC GAGCACGTTT TGCCCGGGAG
GACGTCGTCG AGGAGGCCTG GCGGATCGTC GATCCGATCC TCGCGCATCC CAACCCGGTT
GTCCCGTATC GTCGGGGATC CTGGGGGCCG GACGGTGTCG TCGCCCTCAC GCGCGGCCAC
CGCGGATTTC GCGATCCGTG GCTCGGCGCT TAG
 
Protein sequence
MGGAAAPLGG GSFVDVFVIF GVSGDLARKM TFPSLYRLEE RGALDFPIVG VALDDWSTGD 
LETRMRESVS SQIADAKPSV VDRLGRRLRY VRGDFTSRDT VDALRSAVGR VHQALVYLEI
PPALFAPVIE NLQREPIASE VTYLIEKPFG HDLASAQALN ERLHRVVDEQ SILRIDHFLG
KQPLADLVHL RFANEVLEPL WRREHVEEIQ VTMAEDFGVE DRGSFYDPVG ALRDVVVNHL
LQLLALVLME PPSRPGADGL WDARVAVLRE MDLIEPSRVV RGQYEGYRSI PGVGADSTTE
TFIALALGVH SWRWDGVPVV VRAGKALPVT ATEVRLVLRR PPRLGALGLP EHLEANEIIL
RIDPDSALRV TLQSLDAEER HLAPVHLDLS FRAELGRSPE PYEVLFLAAL EGDRARFARE
DVVEEAWRIV DPILAHPNPV VPYRRGSWGP DGVVALTRGH RGFRDPWLGA