Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_1500 |
Symbol | |
ID | 8323584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | - |
Start bp | 1566825 |
End bp | 1567199 |
Gene Length | 375 bp |
Protein Length | 124 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644952631 |
Product | hypothetical protein |
Protein accession | YP_003110096 |
Protein GI | 256372272 |
COG category | [R] General function prediction only |
COG ID | [COG1837] Predicted RNA-binding protein (contains KH domain) |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0892806 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGACGACT CCGCGAACGT GCCCGCGACG AGCGAGCCGT CGATCTCGCC GACGCAGGGG CTCGCAATCG AGCGAGCGTC GTCGCTCGTC CTGTACCTCA CGAGATCACT CGCGCCGGAG GTTGCCGAGC GCGTCGTCGT GCGCCACGAG CCGGTGCGCG ATGGTGAGCT GTCGCTCTCG GTGACGGTTC CCACGGAAGC GCTCGGTCGA GTCATTGGTC GCGGTGGTCG TACCGCGACG GCGGTGCGCA CGGTGGTCGC GGCGCTTGCG CAGCGGTCTG GTCTGTCGAC GCGGGTGTCG TTCTCCGATG GTCACGATCG ACCTCGGCGA GGTGGGCCTC GGGGCCGATC CGGAGGGCGT CGCGGCCGCG GGTGA
|
Protein sequence | MDDSANVPAT SEPSISPTQG LAIERASSLV LYLTRSLAPE VAERVVVRHE PVRDGELSLS VTVPTEALGR VIGRGGRTAT AVRTVVAALA QRSGLSTRVS FSDGHDRPRR GGPRGRSGGR RGRG
|
| |