Gene Afer_1500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1500 
Symbol 
ID8323584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp1566825 
End bp1567199 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content71% 
IMG OID644952631 
Producthypothetical protein 
Protein accessionYP_003110096 
Protein GI256372272 
COG category[R] General function prediction only 
COG ID[COG1837] Predicted RNA-binding protein (contains KH domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0892806 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACGACT CCGCGAACGT GCCCGCGACG AGCGAGCCGT CGATCTCGCC GACGCAGGGG 
CTCGCAATCG AGCGAGCGTC GTCGCTCGTC CTGTACCTCA CGAGATCACT CGCGCCGGAG
GTTGCCGAGC GCGTCGTCGT GCGCCACGAG CCGGTGCGCG ATGGTGAGCT GTCGCTCTCG
GTGACGGTTC CCACGGAAGC GCTCGGTCGA GTCATTGGTC GCGGTGGTCG TACCGCGACG
GCGGTGCGCA CGGTGGTCGC GGCGCTTGCG CAGCGGTCTG GTCTGTCGAC GCGGGTGTCG
TTCTCCGATG GTCACGATCG ACCTCGGCGA GGTGGGCCTC GGGGCCGATC CGGAGGGCGT
CGCGGCCGCG GGTGA
 
Protein sequence
MDDSANVPAT SEPSISPTQG LAIERASSLV LYLTRSLAPE VAERVVVRHE PVRDGELSLS 
VTVPTEALGR VIGRGGRTAT AVRTVVAALA QRSGLSTRVS FSDGHDRPRR GGPRGRSGGR
RGRG