| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1486 |
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| Symbol | |
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| ID | 8323569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 1556066 |
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| End bp | 1556935 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644952617 |
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| Product | Integrase catalytic region |
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| Protein accession | YP_003110082 |
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| Protein GI | 256372258 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000219526 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGGCGG AGTACGCTCG CTTCGAGATC AAACGGATGG CACGCTTACT CGAGGTCTCC
CGGGCTGGCT ACTACCGATG GCGACGCACC CAGGTAGCAC CGTCGCGTCG GGCATGTGCA
AGACGCGACC TCGAGAACCG AGTGGTCGCG GTCCACCAGG CATCCTCTGG CACCTACGGC
GCACGACGGA TCACGGCGGC ACTCCTCGCC GCTGGCGTGG TGACGAGCCA CAACACGGTG
GCAGCAGCGA TGGCCAGGCG CGGCATCGCC GGTATCAGCC CCAGGAGGTT CCGCCCAGCG
ACCACCCACG CCGATCCGAA GGCGATCTAC CCACCAGACC TCGTTGCCAG GAAGTTCGAC
CCGGGGCGCC TGCACGCCCT CTGGACCTCG GACATCACCT ACCTCGCTCT CGCCGGCGCG
ATGGCATACC TGTGTGTGGT GCGCGACGAG CACTCGCGGC GGGTGCTCGG ATGGAGCGTC
GCGGAGCGCA TGGAGACCAC GCTCGTGCTC GAGGCCCTCG GCCAGGCCGT CGCGGTGCGT
GGGTCCCACG CGCAGGGGGT CATCTGGCAC ACCGACCGAG GGAGTCAGTT CAGCGACCAT
CGAGTTGTGG CCTTCTGTGC CCGACACGGG ATCACGCGCT CCATGGGGCG AACCGGCACC
TGCTACGACC ACGCGAGCGC GGAGTCCTTC TGGTCGATCT TCAAACACGA GTTCTTCTAC
CGCCACGCCT TTGGCGACCT CGCCGAGCTG CGCCGCGGCA TACAGAGCTA CATCCAGTTC
TACAACCACC AGCGCAGCTG CTCGAAGATC GGCTACCTTG CCCCAGTCGT CTTCGAGCAC
CTCGTCGCGG AGGAGGCTCG CGTGAAGTAA
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| Protein sequence | MEAEYARFEI KRMARLLEVS RAGYYRWRRT QVAPSRRACA RRDLENRVVA VHQASSGTYG
ARRITAALLA AGVVTSHNTV AAAMARRGIA GISPRRFRPA TTHADPKAIY PPDLVARKFD
PGRLHALWTS DITYLALAGA MAYLCVVRDE HSRRVLGWSV AERMETTLVL EALGQAVAVR
GSHAQGVIWH TDRGSQFSDH RVVAFCARHG ITRSMGRTGT CYDHASAESF WSIFKHEFFY
RHAFGDLAEL RRGIQSYIQF YNHQRSCSKI GYLAPVVFEH LVAEEARVK
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