| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1412 |
|---|
| Symbol | |
|---|
| ID | 8323495 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | + |
|---|
| Start bp | 1475324 |
|---|
| End bp | 1476505 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644952544 |
|---|
| Product | allantoate amidohydrolase |
|---|
| Protein accession | YP_003110009 |
|---|
| Protein GI | 256372185 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
|---|
| TIGRFAM ID | [TIGR01879] amidase, hydantoinase/carbamoylase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCAC TGCTCGTCGA CCTCTTGGAG CGTGCACGCC CGATCGGTCG GCACGCCGAC
GGTGGCTGGA CGCGTCTCGG GTTCAGCCCC GAGGAGACCG CTCTCGGCGA CCTCGTCATC
GCCGAGGCGA GCCGGATCGG GCTCGACACC TCCCGCGACC GGGCTCAGAA CCTCTGGGCA
TGGCTGGGTG CGCCGGGCCC CGACGCACTG GTGCTCGGCT CCCACCTCGA CTCCGTCCCC
CGTGGCGGCG AACTCGACGG TCCGCTCGGC GTCTTCACTG CGATCGCAGC CCTCGACGCC
CTGCTCGCTC GCGGCTGGCG CCCACGGCGC CCGCTCGCCG TCGTCGCCTT TCGCGACGAG
GAAGGCGGTC GCTTCGGACG CGCCTGTCTC GGCTCGCGCC TGCTCGCCGG CGAACTTGCG
CCCGCCGATC TCGCGACCCT GCGCGATGGG CACGGACGGA GCTTTGCCGA GGTGCTCAGA
GACCTCGAGC TCGAGCCGGC GCGCGTCGGG CCCGATCCCC AACGCATCGC AGCGATCGGC
ACCTACGTCG AACTCCACAT CGAACAGGGT CGCCAGCTCG CACCCCTCGG CGCACCGGTG
GGGATCGCCA CCGGGATCTG GCCCCACGCA CGAGCGCTCG CGACCCTGCC CGGTGAGGCG
AACCACGCCG GCACGACGCC CCTCGATGAC CGTCGGGATC CGGTGGTCAC CCTGGCTCGC
CTCGTCCTCG CCACGCGAGA CCAGGCAGCA CTCAGGGGAG CACTCGCCAC GATCGGCCGC
ATCGACGTCG ACCCCAACGC CCCCAACGCG GTAGCCGGCT CCGCCGCGGC GTGGCTCGAC
GTACGGGCAC CCCAGGCGAC GATCCTCGAT CAGCTCCTCG ACGATCTCGC ACGCCTGGTG
GTCGAGCTCG GCGGGACGTT CGACCTCCGC TCGATGACGC CAGCGACCAT CTTCGATACC
CAGCTCGCCA GCGAGCTCTC CGCGCTCCTC GGTGGTGCCC CACGGATCGC CACCGGAGCG
GGGCACGACG CGGGTATCCT CGCCGACCAC GGCGTACGAG CCGGGATGCT CTTCGTGCGC
AACCCGACCG GCGTGTCCCA CGCCCCCGGG GAACAGGCAA CACCCGCCGA TCTTGCCGCA
GGGCAGCACG CACTCGAGCG AGTCATCGAG GCACTCGCAT GA
|
|---|
| Protein sequence | MTALLVDLLE RARPIGRHAD GGWTRLGFSP EETALGDLVI AEASRIGLDT SRDRAQNLWA
WLGAPGPDAL VLGSHLDSVP RGGELDGPLG VFTAIAALDA LLARGWRPRR PLAVVAFRDE
EGGRFGRACL GSRLLAGELA PADLATLRDG HGRSFAEVLR DLELEPARVG PDPQRIAAIG
TYVELHIEQG RQLAPLGAPV GIATGIWPHA RALATLPGEA NHAGTTPLDD RRDPVVTLAR
LVLATRDQAA LRGALATIGR IDVDPNAPNA VAGSAAAWLD VRAPQATILD QLLDDLARLV
VELGGTFDLR SMTPATIFDT QLASELSALL GGAPRIATGA GHDAGILADH GVRAGMLFVR
NPTGVSHAPG EQATPADLAA GQHALERVIE ALA
|
|---|
| |