Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_1332 |
Symbol | |
ID | 8323411 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | - |
Start bp | 1386814 |
End bp | 1387947 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644952462 |
Product | transcriptional regulator, LacI family |
Protein accession | YP_003109931 |
Protein GI | 256372107 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGACCATTC GCGATGTCGC CCGTCAGGCG GGCGTTGGCA TCGCGACGGT CTCACGCGTG GTCAACGGTT CCGGCCCGGT GGCCGACGTC ACCCGTCGCC ACGTCGAGGA CGCGATCCGT GACCTCGGGT TTCGGCCCAG TCGAGCCGCT CGTTCGCTGC GGCGCCGTGA GTCGAACGTC GTGGGCGTGC TGGTGAGCGG CGTGACCCAG GCATCGGTCG TCGAGCGTGT GCGTGGCCTC ATCAAGGCGC TCGCACCGCT CGGCCTCGAC CCCGTCCTCG TGGACGTTGC CGATCCTCAC CAGCGCGAAC GCGCCCTTGC GGTCCTGGTC GGAGAGGGTG TCGCCGACGC GATCGTGGCG ATCTCGATCG AGGTGCCTGA TGCGTGGTCA TCGCGACTGC GTGAGCGCGG TGGACTCGTC GTGAGCGTCG ACCACGATGC CCCTGGTTGG CCGTCGGTCG TCATCGACAA CGTGCTCGGT GGACGACTCG CTGCCTCGCA CCTCGTCTCG CTCGGTCACG AGCGCATCGG CTTCGTCGGG GATCGGCCGG CCGTCGGCAT GGGCTTCTCT GCGAGCGCGG AGCGCGAGCG AGGCGTGCGG CAGGTCCTCA ATGAGGCGGG CTTGACCTTG CGGCGTGCTT GGGTTCGCCA TCCTCCCTTC GGCGTCGCCG AAGCTGCGGC GAGCGTGCGG TCGCTGCTCG CGAGCGGCTC GCCGCCGACG GCGGTCTCGG TTGCCTCGGA CGTCCAGGCG ATGGGGGTCC TTCGTACGGC GGCGGAGCTC GGCCTGCGCG TGCCCGACGA CCTCTCCATC GTGGGTTTCG ACGACATCGA GCTCGCCGAG GTGATCGGAC TCACGACGGT TCGTCAGCCG CTCGAGGGGA GTGGTGCCTG GGCAGCAGGG GTACTTGCCG CATGGCTCCA TGGCGAGCCC GTCGACGGCG GCCGTGTATG GCTGCCGCTC GAGGTCATCG TTCGCGGAAC GACGGGGCCA GTACGACGCC AGGTGTCGCC TGACGAGTCG TCGGGGTTGA GCGCGGATCG TCGGGTCCGG GGCGATCGCA ACGGCAATCG GAGAGGAGGT GCAGGTGTGC AGACCGCGCC GCGTCGAGCG GTGACGAGCG GTTCGAGGAC GTAG
|
Protein sequence | MTIRDVARQA GVGIATVSRV VNGSGPVADV TRRHVEDAIR DLGFRPSRAA RSLRRRESNV VGVLVSGVTQ ASVVERVRGL IKALAPLGLD PVLVDVADPH QRERALAVLV GEGVADAIVA ISIEVPDAWS SRLRERGGLV VSVDHDAPGW PSVVIDNVLG GRLAASHLVS LGHERIGFVG DRPAVGMGFS ASAERERGVR QVLNEAGLTL RRAWVRHPPF GVAEAAASVR SLLASGSPPT AVSVASDVQA MGVLRTAAEL GLRVPDDLSI VGFDDIELAE VIGLTTVRQP LEGSGAWAAG VLAAWLHGEP VDGGRVWLPL EVIVRGTTGP VRRQVSPDES SGLSADRRVR GDRNGNRRGG AGVQTAPRRA VTSGSRT
|
| |