Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_1299 |
Symbol | |
ID | 8323375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | - |
Start bp | 1351914 |
End bp | 1352633 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644952430 |
Product | ApbE family lipoprotein |
Protein accession | YP_003109902 |
Protein GI | 256372078 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.788342 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCCAGG TCACCTTCGA GGCGATGGGA ACGGTCGTGA GCGTCGCCAT CGAAGGCGTG GAGGATGGAT CGGCGGAGAG TCGGTGCGAG CGGCTCGTCG CCCGTGTCGA GGCACTCGAG CGATCCCTGT CGGCCTGGCG GGACGACTCG GCACTCCTAC GGCGGCGCCG CGGCGAGGTG GTCGACGATC CGGCGCTGCG CGAGGTCGAG GCACTCGCTG AGGTCCTTCG GGTGCTCACT CACGGTGCGT TCGATCCCCA CGGCCCGCTC GGCCTCGATC TCGACGGCGT GGCCAAGGGG TGGATCGTCG AGCGTGCCGC GCTCGAGGCG TTCGCCGATC TCGCGCCCGG TGCACGAGTT TCGGTGGCGG CAGGCGGGGA CGTCTGGCTC CGCGGGGATC ATCGGGTCGG GGTGGCACAT CCCCAGGTCC GAGGTGCCCT CGTGGCCGTG CTTCGGGTCG AAGATGGCGG CGTCGCAACG TCCGGCACGC TGGAGCGAGG CGATCACGTG CGTGCCCCCG GGGGTCAGCT CGCGCTCAGC CAAGCCACCG TGTGCGCGCC CACCCTGTGG CTCGCCGACG GTTTGGCGAC GGCCCTCCTC GTCGCAGGTG AGGCGCTCGC GGCGGCGCTC TCGGCCATCC CCGGGGTGGG GTGGTACGTG GTCACACGCG GCGGCGAGCG TCGTTGGGGT GGTGCGATCG AGGTGCTCGC TTCGGCATGA
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Protein sequence | MSQVTFEAMG TVVSVAIEGV EDGSAESRCE RLVARVEALE RSLSAWRDDS ALLRRRRGEV VDDPALREVE ALAEVLRVLT HGAFDPHGPL GLDLDGVAKG WIVERAALEA FADLAPGARV SVAAGGDVWL RGDHRVGVAH PQVRGALVAV LRVEDGGVAT SGTLERGDHV RAPGGQLALS QATVCAPTLW LADGLATALL VAGEALAAAL SAIPGVGWYV VTRGGERRWG GAIEVLASA
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