| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1286 |
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| Symbol | |
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| ID | 8323362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 1339925 |
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| End bp | 1341901 |
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| Gene Length | 1977 bp |
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| Protein Length | 658 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644952417 |
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| Product | acetate/CoA ligase |
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| Protein accession | YP_003109889 |
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| Protein GI | 256372065 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR02188] acetate--CoA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00108265 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGATC CAACGATCGA GGCGCTCTAC GAAGAGAGCA GGCTCTTCCC TCCACCACCG
AACGTGCTCG AAGGCGCAGA GGTCACCTCG CGCGAGATCT ACGAGCGCGG CCGAGATCCC
ATCGCCTACT GGGAGCAGGA GGCATCGCAC ATCCAGTGGC GCACGCCCTG GACGAGCGTG
CTCGATTGGT CGAACCCGCC CTTTGCGCGG TGGTTCGTCG ACGCAACGCT CAACGTGACC
GAGAGCTGTC TCGATCGTCA CGCCGAGGCC ACGCCCGACA AGGTCGCCTA CTACTTCGAG
GGCGAAGAGG GCGACACCAG GGTCATCACC TATCGCCAGC TCCTCGAGGA TGTCTGCCGC
TTGGCCAACG GTCTTGCGCA GCTCGGCGTC AGCAAGGGCG ACCGCGTCGC GATCTACATG
GGTATGATCC CCGAGTTCCC GATGGCGCTG CTCGCCTGCG CTCGCCTGGG CGCGGTCCAC
TCGGTGGTCT TCGGCGGCTT CTCCGCCGAC GCGCTCGCCG ATCGGATCAA CGACGCCCAA
GCAAGCGTGG TCATCACCTG CGACCAGTCC CGTCGCAAGG GCCAGACCAT CGACCTCAAG
CGCATCACCG ACCAGGCCCT CGAACGATGC CCCAGTGTCC ACCATGTCGT GGTCGTCGAA
CGCACGGGCG CCGACGTTCC CATGACGACC GGCCGAGACG TGCGCTACCA CGACCTCGTC
GCCGACCAGC CGGCCGAGCG GCCCGCCACG GAGACCTCGA GTGAGGACCC GCTCTACATC
CTGTATACCT CCGGGACCAC CGGCAAGCCC AAGGGCATCG TGCACACGAC GGGTGGCTAC
CTGGTCGGGG TGTCGAGCAC GCATCGACTG GTGTTCGATC TGCGGCCCGA CGACGTCTAC
TGGTGCACCG CCGACATCGG CTGGGTGACC GGCCACTCCT ACATCGTCTA TGGCCCGCTC
GCCAACGGGA CCACGAGCGT CCTCTACGAG GGTGTGCCGG ACTACCCCGA TCGCGACCGC
TACTGGGCGA TCATCGAGAA GTACCGCGTG ACCCAGCTCT ACACCGCACC CACTTCGATT
CGGACGTTCA TGAAGTGGGG GGACGAGTAC CCCGGTCGCC ATGACCTGAG CTCGCTCCGC
GTGATCGGCA CGGTCGGCGA ACCGATCAAC CCCGAGGCGT GGATGTGGTA CCGCGAGGTC
ATCGGCCAGA ATCGTTGCCC AGTGGTCGAC ACCTGGTGGC AGACCGAGAC CGGTGCGATG
GTGATCGCAC CGATCCCGAC GGTGACGCCC ACGAAGCCAG GATCGGCGAC CATCCCTCTC
CCCGGCTACC AAGCCGACAT CGTCGACGAC AACGGCGAGT CCGTCCCGCT CGGTGGCGGT
GGCTACCTCG TGCTCACACA CCCGTGGCCG TCGATGGCGC GAACGATCTT CGGCGATCCC
CAGCGCTACA TCGACACCTA CTGGGCGCGC TTCTCCGATC GCGAGCACAA CGTGTGGCGC
TACTTCGCTG GCGACGGCGC CAAGCGCGAC AACGACGGCT ACTTCTGGCT GCTCGGGCGG
GTCGACGACG TGATGAACGT CTCCGGACAC CGCATCTCGA CCCTCGAGGT CGAGTCGGCG
CTCGTCGACC ATCCCGCGGT TGCCGAGGCC GCGGTGATCG GAAGGGCCGA CCCCATCACT
GGCCAAGCGA TCGCGGCCTT CGTGACGCTG CGCGCCGGCA TCGTCGGTGA CGACGCCCTC
CTCGCGGCCC TCCGAGACCA CGTCGCCGAG CGCATCGGCA AGATCGCCCG ACCGGCCTCC
ATCGTCTTCA CCGACGAGCT GCCAAAGACG CGCTCCGGCA AGATCATGCG CAGGCTCCTG
CGCGACATCT CCGAGCAACG CCAGCTCGGC GACGTGACCA CCCTGGCCAA TGCGGACGTC
GTCGCCGAGA TCGCTGCGCG CGCCCAGGCA CAGCAGACAC CTTCCGACGA TCGTTGA
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| Protein sequence | MADPTIEALY EESRLFPPPP NVLEGAEVTS REIYERGRDP IAYWEQEASH IQWRTPWTSV
LDWSNPPFAR WFVDATLNVT ESCLDRHAEA TPDKVAYYFE GEEGDTRVIT YRQLLEDVCR
LANGLAQLGV SKGDRVAIYM GMIPEFPMAL LACARLGAVH SVVFGGFSAD ALADRINDAQ
ASVVITCDQS RRKGQTIDLK RITDQALERC PSVHHVVVVE RTGADVPMTT GRDVRYHDLV
ADQPAERPAT ETSSEDPLYI LYTSGTTGKP KGIVHTTGGY LVGVSSTHRL VFDLRPDDVY
WCTADIGWVT GHSYIVYGPL ANGTTSVLYE GVPDYPDRDR YWAIIEKYRV TQLYTAPTSI
RTFMKWGDEY PGRHDLSSLR VIGTVGEPIN PEAWMWYREV IGQNRCPVVD TWWQTETGAM
VIAPIPTVTP TKPGSATIPL PGYQADIVDD NGESVPLGGG GYLVLTHPWP SMARTIFGDP
QRYIDTYWAR FSDREHNVWR YFAGDGAKRD NDGYFWLLGR VDDVMNVSGH RISTLEVESA
LVDHPAVAEA AVIGRADPIT GQAIAAFVTL RAGIVGDDAL LAALRDHVAE RIGKIARPAS
IVFTDELPKT RSGKIMRRLL RDISEQRQLG DVTTLANADV VAEIAARAQA QQTPSDDR
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