Gene Afer_1218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1218 
Symbol 
ID8323292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp1274896 
End bp1275357 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content68% 
IMG OID644952348 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_003109822 
Protein GI256371998 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0808047 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCCAGG TGAGGCTCGG GGACGAAGCG CCGCCGTTCG TGCTCCCCGG CACCGGTGGA 
CAGCGCTACG ACCTGCGAGC GCAACGCGGG ACGCCGGTCG TGCTCGCGTT CTACCCCGAG
GACTTCTCGC CGGTGTGCTC GGCCCAGCTG CGCGCCTACT CAGCCTCCAT CGATGACTTT
CGCGCGCTCG GTGCCGTGAT GTGGGGGATC TCGCCGCAAG GTCTCGATTC ACACGAGAGC
TTCGTCCAGC GACGTGGGAT CGCCTTTCCG CTGCTCGCCG ACACCGATCG TGAGGTGGCC
CGGTCCTATG GCGTGCTCGG TCCGCTCGGC TTCTATCGGC GGAGCGTCTT CGTGCTCGAT
CGCGACCAGC GGGTGATCTA CCTGCACATC GCGCGGGCTG GACTCACGTT CCGTCCCTCC
GATGAGCTGC TCGAGGCGGT TCGCGAGGCC GTCGGTGCCT GA
 
Protein sequence
MSQVRLGDEA PPFVLPGTGG QRYDLRAQRG TPVVLAFYPE DFSPVCSAQL RAYSASIDDF 
RALGAVMWGI SPQGLDSHES FVQRRGIAFP LLADTDREVA RSYGVLGPLG FYRRSVFVLD
RDQRVIYLHI ARAGLTFRPS DELLEAVREA VGA