Gene Afer_1217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1217 
Symbol 
ID8323291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand- 
Start bp1274409 
End bp1274903 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content70% 
IMG OID644952347 
Productcrossover junction endodeoxyribonuclease RuvC 
Protein accessionYP_003109821 
Protein GI256371997 
COG category[L] Replication, recombination and repair 
COG ID[COG0817] Holliday junction resolvasome, endonuclease subunit 
TIGRFAM ID[TIGR00228] crossover junction endodeoxyribonuclease RuvC 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.331391 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCTGAGG CGAGGCTACG CATCCTCGGC GTCGATCCGG GTCTCGCACG CCTGGGGTAT 
GCGGTGATCG AGGCGACCGG AGATACCCTA CGTCTCGTGG GCGCGGGTCT CGTGACGACG 
GCGGCACGGG CATGCCGTGC CAGTCGGTTG CACGAGATCG CCGAGGGGTT CGAGAGCGTG 
CTCGACGATT TCGATCCGAC GGAGGCGGCG ATCGAGCGTC TTGCCTTCAC GCGCAACGTC 
TCCTCGGCGC TCCCGGTGTC CGAGGTCGTC GGGGTCGTTC GTCTCGCGCT CTGGCGGCGT 
GGGGTGGTGG CCTACGACAT CTCCCCGAAC ACGGTCAAGA ACGCGGCGAC CAGCGGCGGG 
TCGGCGGCCA AGGAGCAGGT TCAGCGGACC GTCGTGCGGC TCCTCGGTCT CGACGAGCCG 
CCGCAGCCGC CCGATGTCGC CGACGCCATG GCGATCGCCT ATACGCGGCT CGCGCAGCGG 
CGGTGGGAGC GATGA
 
Protein sequence
MPEARLRILG VDPGLARLGY AVIEATGDTL RLVGAGLVTT AARACRASRL HEIAEGFESV 
LDDFDPTEAA IERLAFTRNV SSALPVSEVV GVVRLALWRR GVVAYDISPN TVKNAATSGG 
SAAKEQVQRT VVRLLGLDEP PQPPDVADAM AIAYTRLAQR RWER