Gene Afer_1199 details

Gene Information

• Locus tag: Afer_1199
• ID: 8323273
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidimicrobium ferrooxidans DSM 10331
• Kingdom: Bacteria
• Replicon accession: NC_013124
• Strand: +
• Start bp: 1251921
• End bp: 1252376
• Gene Length: 456 bp
• Protein Length: 151 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 644952330
• Product: transcriptional regulator, BadM/Rrf2 family
• Protein accession: YP_003109804
• Protein GI: 256371980
• COG category: [K] Transcription
• COG ID: [COG1959] Predicted transcriptional regulator
• TIGRFAM ID: [TIGR00738] rrf2 family protein (putative transcriptional regulator)

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.046069
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGGGTCT CCACGCGCGG TGACTACGCA GCCCGAGCAT TGCTCTCGCT CGCGCTCCAC 
CCGAGCGACC AACCGACCTC CGTCGCCGAG CTCGCTCGAC GCACCGGGCT ACCCCAGCCC 
TATCTCGAGC AGATCCTCCT CACGCTGAAG GGGGCAGGGC TCGTACGCTC GAAGCGGGGC 
GCAGGCGGCG GCTACACGCT CGGCCGGAGC GCGGAAGAGA TCACCCTTGC CCAGATCATC 
GCGGCCGTCG ACGGGCCGAT CACCGTCGGT GACTTCAAGG AACCCCACGA AGACGGCGCG 
TGTGACCACG AAGGTCAGTG CGCGCTGCTC GAGGTCTGGG CCGAGGTCGG CCACCACATG 
GCCGATCACC TGCGCAGCTA CACCCTTGCC GAGATGGTGC GCCGTGCTCG TGGGCTCCGC 
GGCGACGTGC TCGGCGCCGT CTCGGATCCT CGGTGA 

 

Protein sequence

MRVSTRGDYA ARALLSLALH PSDQPTSVAE LARRTGLPQP YLEQILLTLK GAGLVRSKRG 
AGGGYTLGRS AEEITLAQII AAVDGPITVG DFKEPHEDGA CDHEGQCALL EVWAEVGHHM 
ADHLRSYTLA EMVRRARGLR GDVLGAVSDP R