| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1187 |
|---|
| Symbol | |
|---|
| ID | 8323261 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | + |
|---|
| Start bp | 1239535 |
|---|
| End bp | 1240038 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644952318 |
|---|
| Product | putative phosphohistidine phosphatase, SixA |
|---|
| Protein accession | YP_003109792 |
|---|
| Protein GI | 256371968 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2062] Phosphohistidine phosphatase SixA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.130785 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGTCG TCGCCCGCCA CGCTCCCGCA ACCCGACCCC GGCCGGGCAT GGCCGATCTC
GAGCGCTCGC TCACCGAGGA GGGACTCGTC AAGGCACAAG CACTCTCGGT CGAGCTGGTC
CGGCTCGCAC CGACCCATCT CGTCTCGAGC CCGGCACGCC GCTGCATCGA GACCTTGGCG
CCGCTCGCGA AGGCACTCGA TCTCGAGATC ATCACCGATG ATGGCCTTGG GCCCAGTGCG
AAGGCTCCAC AGATCGCCAT GAGCCTCGCC TACCTCGGAG CGCTCGACGG TGTCACCGTC
GTCGCCACGC ACGCGCCCCA GCTCGAAGTC CTCCTCGAGC AGTTGCTCGC CGATCACGGC
ATCTCCGTGG ACGCCGACGC ACTCCATCTC CCACCGGCCG GCTACGTGAT CGTCGATGTC
GCCGAAGGCG TGCGTCCCCC TCGCATCGAC CGCGTCCGCG CCTACCGCGA CGTGGGAACG
GACCCGCTCC TCCTGGTCGG CTAG
|
|---|
| Protein sequence | MLVVARHAPA TRPRPGMADL ERSLTEEGLV KAQALSVELV RLAPTHLVSS PARRCIETLA
PLAKALDLEI ITDDGLGPSA KAPQIAMSLA YLGALDGVTV VATHAPQLEV LLEQLLADHG
ISVDADALHL PPAGYVIVDV AEGVRPPRID RVRAYRDVGT DPLLLVG
|
|---|
| |