| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1157 |
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| Symbol | |
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| ID | 8323228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1208044 |
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| End bp | 1209018 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644952286 |
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| Product | Prephenate dehydrogenase |
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| Protein accession | YP_003109763 |
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| Protein GI | 256371939 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0287] Prephenate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.190693 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGAGT TCGGGCGTCC GAGCGTTGGG ATCGTGGGGC TCGGCCACAT CGGTGCCTCC
CTCGCCCTCC GGCTCGGTCG CCGTGGCCCA CTCGCGGTGA TCGACGAGGA TCCCGAGGCG
GTCGCTTGGG TTCGCGAACG CACCTCGGCG ACGGTCGGCT GGGACGCCGT CTCGGCAGCC
GAGATCGTGG TCGTCGCGAC GCCGACACCG GTGGTCGGGG ATGTGCTCTG CGCGCTCGGA
GAGCGGGGGG CGCGAGGTCT GGTGCTCGAC GTCGCCTCGG TGAAGCGCCC CGTCGTCGAC
GCTGCACCGG CTGGCCTACG CCATCTCAGC GTCCATCCCA TGGCCGGACG AGAGGGCCAT
GGCGCCGCAT CGGCGGATCC ATCGATCTGG GACGGTGCGT CGTGGGCCTT CGTCCTTCAT
GGGAGCGAGT CCGACGACGA TGTCGCGACC GCGCTCGAGT TCGTCTTCGG CGACGCGGGC
GCGGGTGCGG TGGTCGCACT CGATGCCACG GCGCACGACG AGACGCTGGC CGTGGTGTCT
CATCTGCCCC ACCTCCTCGC CGCTGCGATG GGTCGCGTGC TGGTCGCTGA CAGCGGACAC
CCAGCAGCCT GGTGGCTCGG TTCGGGGTCG CTCCGGGACG CAACCCGCGT AGCGCGGAGC
GATGGGGCTC GTGTCGCAGA GATGGTGGTG CCCAATCGCG ATGCACTCAC GTCGGCCGCC
TCGGTGTTTC GCGCAGAGCT CGAGCGCTTG GTCGCCGACC TCGAGGCGCC GGCGCGGCTT
CGCGCCGACC TTGACGAAGC GTGGGTGGGG GCCTCGCGCG TGGTGGCAGA CGTCGTCGCA
ACCGAGACGG TCGAGGTGCG CTCCGATCTT GCACGGGCGC TGCTTGCGGT CAGCGAGGCT
GGTGAGGCTG TGATCGGGTT CGTGGCTCCG AGGACCGTCG CGCTCGCTCG GCGCGCGACC
CCCACCACGA GCTGA
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| Protein sequence | MAEFGRPSVG IVGLGHIGAS LALRLGRRGP LAVIDEDPEA VAWVRERTSA TVGWDAVSAA
EIVVVATPTP VVGDVLCALG ERGARGLVLD VASVKRPVVD AAPAGLRHLS VHPMAGREGH
GAASADPSIW DGASWAFVLH GSESDDDVAT ALEFVFGDAG AGAVVALDAT AHDETLAVVS
HLPHLLAAAM GRVLVADSGH PAAWWLGSGS LRDATRVARS DGARVAEMVV PNRDALTSAA
SVFRAELERL VADLEAPARL RADLDEAWVG ASRVVADVVA TETVEVRSDL ARALLAVSEA
GEAVIGFVAP RTVALARRAT PTTS
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