| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1108 |
|---|
| Symbol | |
|---|
| ID | 8323178 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | - |
|---|
| Start bp | 1155114 |
|---|
| End bp | 1155731 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644952236 |
|---|
| Product | imidazole glycerol phosphate synthase, glutamine amidotransferase subunit |
|---|
| Protein accession | YP_003109714 |
|---|
| Protein GI | 256371890 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0118] Glutamine amidotransferase |
|---|
| TIGRFAM ID | [TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGCTG CCATCGTTGT TGCCGACATC GGTATCGGCA ACATCGGGGC TGCCGTGGGG
GCGTGGCGGG CACTCGGCCA TCCGGTCAGG CGGGGGAGCG ACCGAGCCGA TTTCGACGAG
GCGCGGCTGC TCGTCGTGCC CGGCGTCGGT CACCTCGGCA GCGTGCTCGA CGCTCTCGCG
GCGACCGGTC TCGACGAGGC GATGGTGCGC CGTCGCGAGC GCGGCATGGC GACCTTGGGC
GTCTGCGTGG GCATGCAGGC GCTCTTCGAC GGCGGCGACG AGGCGCCCGA TCGTGTGGGA
CTTGGTCTCT TGCCCGGCTG GGTCGAGCGC ATGAGCCCTG CGCCCCGTCT GCCGGAGATG
CAGTGGAACC GGTTGCGAGT GGCGGAGGGG GCCTCGGGGC CACTGGCGGT CCTCGAGGGT
GCGTGGGTGT ACTTCGTCCA CAGTTACGCC GTCGCGACGA CGCCTGCGGC GCTTGCCTTC
GAGGAGTTCG GTGGCACCTG GGTCGCCGCC GCCGGTCGCG ATGCGCTGCT CGGTGTGCAG
TTCCACCCCG AGCGCTCGGG GGCGAAGGGT CTGCGCTTCC TCGATGCGCT GTGGCGATGG
GTCCAGGAGG AGTGTTAG
|
|---|
| Protein sequence | MSAAIVVADI GIGNIGAAVG AWRALGHPVR RGSDRADFDE ARLLVVPGVG HLGSVLDALA
ATGLDEAMVR RRERGMATLG VCVGMQALFD GGDEAPDRVG LGLLPGWVER MSPAPRLPEM
QWNRLRVAEG ASGPLAVLEG AWVYFVHSYA VATTPAALAF EEFGGTWVAA AGRDALLGVQ
FHPERSGAKG LRFLDALWRW VQEEC
|
|---|
| |