Gene Afer_1086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1086 
Symbol 
ID8323156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand+ 
Start bp1132024 
End bp1132944 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content68% 
IMG OID644952214 
Product3-oxoacyl-(acyl-carrier-protein) synthase III 
Protein accessionYP_003109692 
Protein GI256371868 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.298736 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAGCAC GGATCATCGG GGTCGGCCAG GCCGTCCCGG ATCGGGTCGT CACCAACGCC 
GATTTCGAGG CCTATCTCGA CACCTCTGAC ACCTGGATCA CCGAACGCAC CGGCATCCGC 
GAGCGCCGCT TCGGCGGCAC CACCTCGAGC CTGGCCATCG AGGCGGGGCG ACGCGCGATC 
GCCGACGCCG GGTTGACCCC CGGCGACATC GACTTCCTCG TCCTGTCGAC GACGACGCCC 
GATCAGACGG TCCCGGCCAC ATCTGCCGAG GTATCCCACC AGCTCGGAAC CCGCGGTGGC 
GCCATGGACC TCAATGCTGC CTGCGCGGGC TACGTCTATG CCCTCGTGGT CGCACGTGGC 
ATGATCGCCT CTGGGGCACA CCGGGTGCTC GTCATCGGAT CCGACACCCT CTCGCGCATC 
ACCGACCAGA ACGACCGCTC GACGGCCGTC CTCTTCGCAG ACGGTGCTGG TGCGGTCGTC 
ATGGAGCGTG CCGACGAGGA CGACCTCCTC GGCTGGGACC TCGGTGTCGA CGGGGCGGCG 
CGCCCCATCT TGTACTGCGA CCACGGCGGC TACATGTACA TGGAGGGACG CGAGGTGTTC 
AAGCGCGCCG TTCGCGTCAT GGTTGAGTCG TCGGAGACCG CGATGAAGCA AGCTGGCGTG 
AACGCCGACG ACATCGCGCT GCTCGTACCC CACCAGGCAA ACCTGCGCAT CATCCAAGCC 
GCCAACGAAC GCCTCGGCAT CTCGCTCGAC CGTACGGCCG TCGTGCTCGA TCGCTACGGC 
AACACCTCGT CCGGCTCGAT CCCGCTGGCC TTGGCCGACG CCGTCGCCCA AGGGCGCCTC 
CATCCCGGTG ATCACGTCCT CTTCACGGGC TTTGGTGCCG GCATGACCTG GGCAAGTGCG 
GTCTGGCGGT GGGCCAGATG A
 
Protein sequence
MGARIIGVGQ AVPDRVVTNA DFEAYLDTSD TWITERTGIR ERRFGGTTSS LAIEAGRRAI 
ADAGLTPGDI DFLVLSTTTP DQTVPATSAE VSHQLGTRGG AMDLNAACAG YVYALVVARG 
MIASGAHRVL VIGSDTLSRI TDQNDRSTAV LFADGAGAVV MERADEDDLL GWDLGVDGAA 
RPILYCDHGG YMYMEGREVF KRAVRVMVES SETAMKQAGV NADDIALLVP HQANLRIIQA 
ANERLGISLD RTAVVLDRYG NTSSGSIPLA LADAVAQGRL HPGDHVLFTG FGAGMTWASA 
VWRWAR