Gene Afer_0977 details

Gene Information

• Locus tag: Afer_0977
• ID: 8323041
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidimicrobium ferrooxidans DSM 10331
• Kingdom: Bacteria
• Replicon accession: NC_013124
• Strand: +
• Start bp: 995633
• End bp: 996271
• Gene Length: 639 bp
• Protein Length: 212 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 644952105
• Product: Rieske (2Fe-2S) domain protein
• Protein accession: YP_003109589
• Protein GI: 256371765
• COG category: [P] Inorganic ion transport and metabolism; [R] General function prediction only
• COG ID: [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCTGAGCG TCGCCGTCGT CGGTGACGAA GGGGTGGTCG CGCGCGTAGT GCGCGCCGCC 
TCCCCATTCG GCTGGGAGGT AACGAGCGAC CTTGGGGCTG CCGATGTCGT GGTCGTGCCG 
GCCGGCGACC CCGAGGCACT TCGAGCGGTC GGTGCTCGCC GTGCCCGAGG CGAGGCGATC 
GTCGCGATCG CCTATGTCGC CGAGCCAGAT CAGCTGGCCT GGCGCGCAGC CGAGCGCGGC 
GGTGCGGATC GCGTCGTCAA CGTCGGTGCG TTGACGAAGA CGCTTCGCGA GGTGCTCGGG 
GATCCCTCGC GAGGCGTCAG GCGCCTCGTC GTGGGGCACG TCGAGGACGT GGCGGGGCGG 
TTGGGCCTCG TGGGCGAGGT CGAGATCGAC GGCGCTTCGT TCATGGTCCT GCGCGTCGAG 
GGACGATGGG TCTGCCTCGA GGCGACCTGT CCGCATCAGG GAGCGCGTCT TGCCGGGGTC 
CCGTGCGAGG AGGGTGTGCT GACGTGTCCG GCGCACGGCT CGCAGTTCTC GTGCGAGAGC 
GGGGAGCGCG TGCGTGGTCC GGCTGACCGG GCACTCCGTT CGCTCGCTGT GGTGGTGGAA 
GGATCGGAGC TGGTCGTACG TGGGGGAGGG GTTGGCTGA 

 

Protein sequence

MLSVAVVGDE GVVARVVRAA SPFGWEVTSD LGAADVVVVP AGDPEALRAV GARRARGEAI 
VAIAYVAEPD QLAWRAAERG GADRVVNVGA LTKTLREVLG DPSRGVRRLV VGHVEDVAGR 
LGLVGEVEID GASFMVLRVE GRWVCLEATC PHQGARLAGV PCEEGVLTCP AHGSQFSCES 
GERVRGPADR ALRSLAVVVE GSELVVRGGG VG