Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0927 |
Symbol | |
ID | 8322991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 946623 |
End bp | 948158 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644952059 |
Product | Curculin domain protein (mannose-binding) lectin |
Protein accession | YP_003109543 |
Protein GI | 256371719 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGGGTGTG GCGCTGCCTG CCCTTCATGT GGTCTCTTCC TCCCACTCGT CCATGCTGGT CGGGGTGCTC ATGGAACGGG TGGTCTCGTT GCAGGAGGGC CGGCCAGGGT ACTCGATGAT CGCGAGGTGG TCGACGCGGT CTGTGGAGGT GCAGGCTTGC CGACGACGCT GGGTGCACCA GCCGCACCAG CGCTCGGCGG CGTGGCGCTG TGGCTTGGTG GCCACGAGAT CGTCGTGGAG GGGGTACGGA GGCCCAGCTA CGGCGTGGAC GACGCAGCTG GTAGTGCCGT CGTGACGGCG TCGGCTCCGC CCAGGCGCTC CTGGACGCCT GTTGAAGGCT ACTTCACGGT CACGTTGCAG CCAACCCAAG GGCACCACCG CCGTCCGGCT CAGCTCCCTC CCCTGCCAGA TGACAACCGC CGGGACAACA ACTTGTCATC TTTTCGTCCG GGTCGTGAGG CTGAGGCTAT ACTCCGCTCA GGCGCCTCCG CAAAGGTCGT ACGGCTCGAG GGCTCTCGGG GCTCATCGCT GCGCGTCTCC TCCGAAGGGA GCCGAGATAT GCACCCGTCT AAGCAGATGA CCTTCTTGCG CAAGGAACTC GCCCTTGGCA CGATCCTGAC GTCTGCGCTG GCCTTCTTAC TTTTCTCACC CTTGGGTACA ACCAGCGTGG CTGCGTCGAA AACGGCAGTC GCCCCGATGC CCGCACCATC AGGCGACCCT TCTCAGCCTG CCGGTATTTG TTGCAGTACC CAGAACTTGG GATCCACCAT CGGTGAAGGC ACTGTTCTCA ATCCCGGCGA CTATCTACTC TCAAGTTCTG GACAATACCA GCTCATCATG CAAGGCGACG GCAACTTTGT CCTCTACAAC TTGTACAACG GTCAAGCATT GTGGGCGACT GGTACTGAAG AGCACTCTGG CGCCTACGCA GTGTTTCAGA ACGACGGCAA CCTTGTTGTT TACTTCAATG GGACTGCGCT GTGGGATAGC CATACGTATA CCTACTCTGG TCTGACACTG ACAATGCAGA ACGATGGCAA CGCAGTCATC TATCAAGGTA CCCAGCCGCT ATGGGCAACG GATACAGCTG CGAACGAGTT GGACTGTTGG CCTTCCAACA ACTGCACACC CGGCTTGTTC ATCTATGCCT ATCTTCAATT CCCGCCAACA GCGCCGTTGC AGGGAGTGAA CGCACCGACA ACGGGTGCCA ACACGTTTGC GATGTCCAAG TGGGAACAAC AAGAAGACAG CGTCATTCAG TCAAACCCTC TCGACACGAC GCAAAAGGAG CCTGGCTCCT ACACCCTGAA GGGCAACTCT GCCAACGTTC AAGTGTATAC GAATTCTGAT GGTGAGTCCG CTGATTACTG GGGCATTGAC GCATTTGATC AGACTATTTC TTACCTTCCA TATTATGGGC CGATTATCTC GGTTCTTAGA AATCCAGTGA ACAGTCCCTA CCAGCAATGC GTCAATCTCG CGAATGCTGT AAGCAGCACC CTTTGGGGGA CGATTAATTT CTCAGATCTG TGTTAG
|
Protein sequence | MGCGAACPSC GLFLPLVHAG RGAHGTGGLV AGGPARVLDD REVVDAVCGG AGLPTTLGAP AAPALGGVAL WLGGHEIVVE GVRRPSYGVD DAAGSAVVTA SAPPRRSWTP VEGYFTVTLQ PTQGHHRRPA QLPPLPDDNR RDNNLSSFRP GREAEAILRS GASAKVVRLE GSRGSSLRVS SEGSRDMHPS KQMTFLRKEL ALGTILTSAL AFLLFSPLGT TSVAASKTAV APMPAPSGDP SQPAGICCST QNLGSTIGEG TVLNPGDYLL SSSGQYQLIM QGDGNFVLYN LYNGQALWAT GTEEHSGAYA VFQNDGNLVV YFNGTALWDS HTYTYSGLTL TMQNDGNAVI YQGTQPLWAT DTAANELDCW PSNNCTPGLF IYAYLQFPPT APLQGVNAPT TGANTFAMSK WEQQEDSVIQ SNPLDTTQKE PGSYTLKGNS ANVQVYTNSD GESADYWGID AFDQTISYLP YYGPIISVLR NPVNSPYQQC VNLANAVSST LWGTINFSDL C
|
| |